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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS19064.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
19064.2 |
Reviewed, update pending |
Mus musculus |
5 |
Rbm48 |
23 |
108 |
98 |
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Public Note for CCDS 19064.2 |
The coding region has been updated to extend the N-terminus to one that has some support in the available conservation data. The use of an alternative upstream start codon would result in a protein that is 42 aa longer. |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 19064.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000042753.13 |
ENSMUSP00000040952.7 |
Accepted |
alive |
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NCBI |
NM_172991.4 |
NP_766579.3 |
Updated |
not alive |
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NCBI |
NM_172991.5 |
NP_766579.4 |
Pending |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_766579.4 |
371 |
Q8K2X2-1 |
371 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 19064.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1242 nt): ATGATCGTCGATGGGGTCGATCCTTCAGCCAATCCTAGCACGCCTGGTCCATCCTGCTCTCTTATTGGAC TCAGAGGAGCGCGGCTGGCGGATGTTGTTCTGGCGCGGGGGACTAGAGCCGGCAAGATGGCATCCAGTGA CGGGAAACCTGGTGGCGTATTCGATCACCACGTCCAGACGGCTGTGTGTGACTCGCGGGCCAAATACCGG GAGGGCCGACGCCCTCGCGCGGTCAAGGTATATACAATCAATTTGGAGTCTCAGTACTTACTAATACAAG GAGTTCCTGCAGTGGGAGCCATGAAGGAATTAGTTGAGCGTTTTGCTCTGTATGGTGCGATTGAACAGTA TAACGCTCTAGATGAATACCCAGCGGAAGATTTTACAGAAGTTTATCTCATTAAATTTGTGAAATTACAG AGTGCAAGGGTAGCTAAGAAAAAGATGGATGAACAGAGCTTCTTTGGAGGGTTACTTCATGTGTGCTACG CTCCAGAATTTGAGACAGTTGAAGAAACTAGAAAAAAATTACAAGAAAGAAAGGCTTATATTACAAGAGT TACTAAAAACCAAGATTGTTACATGGCGAAGAAGAAACCAGTTCCAGAGCAGAAAGGAACAAAAGATTCT AGACAAGGTTTCCATCCACCTATGCCTGGATTTGGTACAGCTGCTTTAAACACATCTCCTGAGAGTCCTC CAGAGAACTCGAGTTCTTGTCTTCCTTATTCTTGTGAATTCCCTTTAAGCTGTTTTGCTTCCAAGAGCAC ATGTTCACGTGGGGAACATGTGGACAGAGTATCAGACTCCTGTAATAGTGCTAGGAACCATGGTGAACTG TCTAGGCATCGTGACCACAGTGCCTTTTCACCAAAGCTGCAGATGAACACTTACAAAAACTCCGTCCCTT GCTCTAGTGTGCAAGAGGCCATTGCTACCTCACAGGCAGTTGGCAGGTTCATGCCTAGGACAACACAGCT GCAGGAGAGGAAACGGCGGCGAGACTGTGATCGAGAACTGGGAACTCTGCTTGAGACACACACAAGCAGT AACGAGGTTTTGATTGGACCTAAGTTACCAGGTATCCCCACAGTAGATCTGCAGGACGACTCCTTGAATA CAACGGCAACCTTAATTCGGAGGAAACTTAAAGAGGTGATTTCATCTGTGCCAAAGCCTCCAGAGGACAA TATAAAAGACGTGTGTACAAGTCACCCAGGAAAACAAAGAAGAAGAATATAG
Translation (413 aa): MIVDGVDPSANPSTPGPSCSLIGLRGARLADVVLARGTRAGKMASSDGKPGGVFDHHVQTAVCDSRAKYR EGRRPRAVKVYTINLESQYLLIQGVPAVGAMKELVERFALYGAIEQYNALDEYPAEDFTEVYLIKFVKLQ SARVAKKKMDEQSFFGGLLHVCYAPEFETVEETRKKLQERKAYITRVTKNQDCYMAKKKPVPEQKGTKDS RQGFHPPMPGFGTAALNTSPESPPENSSSCLPYSCEFPLSCFASKSTCSRGEHVDRVSDSCNSARNHGEL SRHRDHSAFSPKLQMNTYKNSVPCSSVQEAIATSQAVGRFMPRTTQLQERKRRRDCDRELGTLLETHTSS NEVLIGPKLPGIPTVDLQDDSLNTTATLIRRKLKEVISSVPKPPEDNIKDVCTSHPGKQRRRI
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