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Report for CCDS21604.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21604.1 Public Mus musculus 7 Or51a10 23 108 98 CCDS HistoryNCBI Gene:258326Re-query CCDS DB by CCDS ID:21604.1Re-query CCDS DB by GeneID:258326See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21604.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052660.1 ENSMUSP00000061462.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052660.1Link to Ensembl Protein Viewer:ENSMUSP00000061462.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000052660Re-query CCDS DB by Protein ID:ENSMUSP00000061462
Original member Current member EBI ENSMUST00000214299.1 ENSMUSP00000148961.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214299.1Link to Ensembl Protein Viewer:ENSMUSP00000148961.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214299Re-query CCDS DB by Protein ID:ENSMUSP00000148961
Original member Current member NCBI NM_146329.1 NP_666441.1 Accepted alive Link to Nucleotide Sequence:NM_146329.1Link to Protein Sequence:NP_666441.1Re-query CCDS DB by Nucleotide ID:NM_146329Re-query CCDS DB by Protein ID:NP_666441Link to BLAST:NP_666441.1

Chromosomal Locations for CCDS 21604.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 104049408 104050352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGAGAACCTTGTACAGTAACACCTCAAGCACCTTAAGCTTCATGCTGACGGGCTTCCCAGAGATGCAGA
GTCTGGAGCACTGGCTGGCTGCCCTCCTGCTGCTGCTGTATGTTATCTCCATAGTAGGCAATGCCCTGAT
TCTCTTCATCATAAAGGAGGAACAGAGTTTGCACCATCCTATGTACTACTTCTTGTCCCTTCTGTCTGTC
AACGACCTGGGAGTGTCTTTTTCTACATTGCCAACGGTGCTTGCTTCTATGTGTTTTCATATCCCAGAGA
CTGCCTTCGATGCTTGCCTGGCCCAGATGTTCTTCATACACTTTTTTTCCTGGACAGAGTCTGGGATTCT
ACTGGCTATGAGTTTTGACCGGTACGTGGCTATCTGTAACCCTTTGCATTATTCCTCAGTGCTTACTGAT
GCCCGTGTGGCCCACATGGGTATGTCCATCATCATCCGCAGTTTCTGCATGGTCTTCCCACTTCCTTTCC
TACTGAAGAGGCTACCCTTCTGTAAGGCCAATGTTCTGACCCATTCCTACTGCTTACACCCAGACCTGAT
ACGCTTGCCCTGTGGAGATACCACCATCAACAGCATGTATGGGCTGTTCATTGTCATCTCTGCTTTTGGT
GTAGACTCAGTGCTCATCCTCCTCTCCTATGTGCTCATTCTGCGCTCTGTGCTGGCCATTGCCTCCAGGG
AAGAAAGGCTTAAGACACTCAACACATGTGTATCACATATCTCTGCTGTGCTCATCTTCTATGTACCCAT
GATTAGTGTGTCAATGGTCCATAGATTTGTAAAACATGCGCCAGAGTATGTGCACAAGTTCACATCCCTG
GTCTATCTCTTTGTGCCTCCAATGCTCAATCCTATTATCTATTCCATCAAGACAAAGGAGATTCGTAGGA
GACTGCACAAGATGTTACTGGGTACCAAGTTCTGA

Translation (314 aa):
MRTLYSNTSSTLSFMLTGFPEMQSLEHWLAALLLLLYVISIVGNALILFIIKEEQSLHHPMYYFLSLLSV
NDLGVSFSTLPTVLASMCFHIPETAFDACLAQMFFIHFFSWTESGILLAMSFDRYVAICNPLHYSSVLTD
ARVAHMGMSIIIRSFCMVFPLPFLLKRLPFCKANVLTHSYCLHPDLIRLPCGDTTINSMYGLFIVISAFG
VDSVLILLSYVLILRSVLAIASREERLKTLNTCVSHISAVLIFYVPMISVSMVHRFVKHAPEYVHKFTSL
VYLFVPPMLNPIIYSIKTKEIRRRLHKMLLGTKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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