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Report for CCDS17315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17315.1 Public Mus musculus 3 Adad1 23 108 98 CCDS HistoryNCBI Gene:21744Re-query CCDS DB by CCDS ID:17315.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17315.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000144629.7 ENSMUSP00000115260.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000144629.7Link to Ensembl Protein Viewer:ENSMUSP00000115260.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000144629Re-query CCDS DB by Protein ID:ENSMUSP00000115260
Original member Current member NCBI NM_009350.3 NP_033376.2 Accepted alive Link to Nucleotide Sequence:NM_009350.3Link to Protein Sequence:NP_033376.2Re-query CCDS DB by Nucleotide ID:NM_009350Re-query CCDS DB by Protein ID:NP_033376Link to BLAST:NP_033376.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033376.2 619 Q5SUE7-1 619 100% 0 0

Chromosomal Locations for CCDS 17315.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 37063723 37063840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37064181 37064360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37065070 37065258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37067175 37067342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37069957 37070025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37076614 37076739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37079788 37079911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37083183 37083353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37084928 37085157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37091860 37092097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37106132 37106264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37111354 37111467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1860 nt):
ATGGCGACCGCGGGCGGCAGCCGACGAGCCCCGGTCCCGGGCCCTCGGCTCGGCCTGCCTCTGGCAGCTC
ACCTGCCGGCGAGCCTGGGCGGGGAGGGCGCGAAGGACAGCGTCGGGGGAGAGAAAACTTCTGGAAACAA
TGACTGGTTTCAGAGTTCCAGGGTTCCCAGCTTTGCTCAGATGCTGAAAAAGAATTTGCCAGTTCAGCCA
TCAGCTCAGACAGTAACTTTGCCCACTGGATATTCCTCTGAAAGTTGTAGTCTGTCGAATATGGCATCCA
AGGTTACGCAAGTGACAGGTAATTTTCCAGAGCCATTGCTTTCCAAAGGTCTTTCATCTATTTCAAATCC
TGTCCTTCCTCCAAAAAAACTACCTAAAGAGTTTATAATGAAATACAAACGTGGAGAGATCAATCCCGTG
TCGGCCTTGCACCAGTTTGCACAAATGCAGCGTGTTCAGCTTGACCTTAAGGAAACTGTAACAACAGGAA
ATGTTATGGGACCATATTTTGCTTTTTGTGCTGTGGTGGATGGTATTCAGTACAAGACAGGACTGGGACA
GAATAAAAAGGAATCAAGATCCAATGCAGCAAAGTTAGCTCTTGACGAGCTTCTACAACTGGATGAGCCT
GAACCGAGAGTTTTAGAACCAGCAGGACCACCTCCTATCCCTGCAGAACCTGTTGTTACACCTGAAGCAG
CATATGTTTCAAAAGTGCAATATGAAGGGAGACAAGTCCAGTATGCCAAGATTTCACAGCTTGTTAAAGA
AACATTTGGTCAACTAATTTCTAATCACTCACAATATCTGAAATGTAGCAGTTCATTGGCTGCTTTCATT
ATTGAAAGAGCTGGACATCATGAAGTTGTGGCTATAGGCACAGGCGAATACAACTACAGCCAGTGCATCA
AGCCAAATGGAAGGGTGCTGCACGATACTCATGCAGTTGTTACAGCAAGAAGGTCTCTCCTTAGGTACTT
TTATAGACAGCTTCTGCTCTTCTATAGCAAAAATCCTGCTATGATGGAAAAGTCAATCTTTTGTACAGAA
CCAGCTTCTAATCTACTTACTCTGAAACAAAACATCAACCTTTACCTCTATATGAACCAGTTGCCGAAAG
GATCAGCCCAGATTAAGTCACAGTTACGCCTTAATCCACATTCTATTTCTGCGTTTGAAGCCAATGAAGA
GCTGAGTCTCCATGTGGCTGTTGAAGGCAAAATTTATCTTACTGTTTACTGTTCTGCAGACGGGGTTAAT
AGAGTAAACAGTATGTCCTCAAGTGACAAGCTGACAAGATGGGAGGTGCTTGGTGTACAGGGAGCCTTGC
TGAGTCACTTTATACAGCCAGTTTATATCAGCAGTATACTTGTTGGTGATGGGAATTGCAATGACACAAG
AGGCTTAGAAATCGCAATAAACCAGCGTGTTGATGACGCACTCACATCAAAACTGCCCATGTTTTACTTG
GTCAACAGACCTCATATTAGCTTAGTGCCCACCGCATATCCTCTGCAGATAAACTTGGACCATAAATCAC
TCAGTTTGAATTGGGCACAAGGGGACAATTCTTTGGAGATTGTGGATGGCCTAAATGGGAAGATTACTGA
AAGTTCTCCATTTAAAAGTGGTTTATCAATGGCAAGTCGGCTTTGTAAGGCTGCAATGTTAAGTCGATTT
AATCTGCTTGCCAAGGAAGCTAAAACAGATGATTTACTTGAAGCTCGGACATACCACGCGGCTAAGTGTA
TGTCTGGACCCTATCAAGAAGCAAAGGCGTTACTGAAGGCCTACTTGCAGCAGCATGGCTATGGCTCCTG
GATTGTGAAATCTCCCTGTATAGAGCAATTTAGTATGTGA

Translation (619 aa):
MATAGGSRRAPVPGPRLGLPLAAHLPASLGGEGAKDSVGGEKTSGNNDWFQSSRVPSFAQMLKKNLPVQP
SAQTVTLPTGYSSESCSLSNMASKVTQVTGNFPEPLLSKGLSSISNPVLPPKKLPKEFIMKYKRGEINPV
SALHQFAQMQRVQLDLKETVTTGNVMGPYFAFCAVVDGIQYKTGLGQNKKESRSNAAKLALDELLQLDEP
EPRVLEPAGPPPIPAEPVVTPEAAYVSKVQYEGRQVQYAKISQLVKETFGQLISNHSQYLKCSSSLAAFI
IERAGHHEVVAIGTGEYNYSQCIKPNGRVLHDTHAVVTARRSLLRYFYRQLLLFYSKNPAMMEKSIFCTE
PASNLLTLKQNINLYLYMNQLPKGSAQIKSQLRLNPHSISAFEANEELSLHVAVEGKIYLTVYCSADGVN
RVNSMSSSDKLTRWEVLGVQGALLSHFIQPVYISSILVGDGNCNDTRGLEIAINQRVDDALTSKLPMFYL
VNRPHISLVPTAYPLQINLDHKSLSLNWAQGDNSLEIVDGLNGKITESSPFKSGLSMASRLCKAAMLSRF
NLLAKEAKTDDLLEARTYHAAKCMSGPYQEAKALLKAYLQQHGYGSWIVKSPCIEQFSM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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