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Report for CCDS64359.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64359.1 Public Homo sapiens 6 NUP153 24 110 108 CCDS HistoryNCBI Gene:9972Re-query CCDS DB by CCDS ID:64359.1Re-query CCDS DB by GeneID:9972See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 64359.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537253.5 ENSP00000444029.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537253.5Link to Ensembl Protein Viewer:ENSP00000444029.1Re-query CCDS DB by Nucleotide ID:ENST00000537253Re-query CCDS DB by Protein ID:ENSP00000444029
Original member Current member NCBI NM_001278209.2 NP_001265138.1 Accepted alive Link to Nucleotide Sequence:NM_001278209.2Link to Protein Sequence:NP_001265138.1Re-query CCDS DB by Nucleotide ID:NM_001278209Re-query CCDS DB by Protein ID:NP_001265138Link to BLAST:NP_001265138.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265138.1 1506 P49790-3 1506 100% 0 0

Chromosomal Locations for CCDS 64359.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 17616097 17616181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17616527 17616695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17624561 17624833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17625808 17626164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17628655 17629539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17632650 17632844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17637153 17637770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17639939 17640064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17646067 17646154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17647807 17647905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17649163 17649300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17651834 17651926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17661653 17661779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17662018 17662070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17665239 17665385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17668975 17669028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17669293 17669337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17669430 17669546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17674905 17675033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17675229 17675368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17675522 17675770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17688396 17688618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17706277 17706387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4521 nt):
ATGGCCTCGGGAGCCGGAGGAGTCGGAGGGGGCGGTGGCGGCAAGATCCGGACGCGGCGTTGCCACCAGG
GGCCAATTAAGCCTTACCAGCAGGGGCGACAACAGCATCAGGGCATTCTTAGCAGGGTTACAGAATCTGT
TAAGAATATTGTGCCAGGGTGGCTACAAAGATACTTCAACAAGAATGAAGATGTATGCAGCTGTTCAACA
GACACAAGCGAGGTTCCACGCTGGCCAGAAAATAAAGAGGACCATCTGGTATATGCCGATGAGGAGAGCT
CTAATATTACTGATGGGAGAATCACACCTGAGCCAGCAGTCAGTAATACAGAAGAACCTTCAACAACTAG
TACTGCTTCAAATTATCCAGATGTGTTAACAAGGCCTTCTCTTCATCGGAGCCATCTGAATTTTTCCATG
TTGGAATCCCCTGCATTACACTGTCAGCCATCTACATCCTCGGCATTCCCAATTGGCAGTTCGGGATTTT
CCCTTGTAAAGGAAATTAAAGATTCTACCTCTCAGCATGATGATGATAACATCTCAACTACCAGTGGTTT
TTCTTCAAGAGCTTCTGATAAAGATATAACTGTTTCAAAGAACACTTCATTGCCACCTCTGTGGTCCCCA
GAAGCTGAACGTTCTCACTCACTCTCACAGCACACTGCCACCAGCTCAAAAAAACCAGCATTCAACTTGT
CTGCCTTTGGAACACTTTCCCCTTCACTTGGGAATTCTTCAATCCTTAAAACCAGTCAGCTTGGAGATTC
TCCTTTTTATCCTGGAAAAACAACATACGGTGGGGCAGCAGCTGCTGTAAGACAGTCTAAACTACGAAAT
ACACCTTATCAGGCACCAGTTAGAAGACAAATGAAAGCTAAGCAACTCAGTGCACAATCTTACGGTGTGA
CCAGTTCAACAGCTCGGCGAATATTGCAGTCTTTAGAGAAGATGTCAAGCCCTTTAGCGGATGCAAAAAG
AATTCCATCCATTGTTTCTTCTCCTCTGAATTCTCCTCTTGATAGGAGTGGGATAGATATCACAGATTTT
CAGGCCAAAAGAGAAAAGGTGGATTCTCAATATCCTCCTGTTCAGAGACTTATGACCCCAAAGCCAGTTT
CCATAGCAACAAATCGAAGTGTTTATTTTAAACCATCTCTGACTCCTTCTGGTGAATTCAGGAAGACTAA
TCAAAGAATAGATAACAAGTGCAGTACTGGATATGAAAAAAATATGACACCCGGACAAAATAGAGAACAA
CGAGAAAGTGGCTTTTCATATCCAAATTTCAGTTTGCCTGCAGCCAATGGTTTATCTTCTGGAGTAGGTG
GTGGAGGTGGCAAGATGAGACGAGAAAGAACACGCTTTGTTGCTTCTAAACCTCTGGAGGAGGAGAGACA
AGGTCTCACCGTATTGCCCAAGCTGATCTCGAGCTCCTGCGCTCAAGCGATCATCCCATCTTGGCCTCTC
AAAGTGCTGAGATTACAGGAAATGGAAGTTCCAGTATTACCGAAAATCTCTCTACCGATCACCAGTTCTT
CACTGCCTACCTTTAATTTTAGTTCCCCTGAGATCACAACTTCCTCTCCATCACCCATCAATTCGTCTCA
AGCATTAACAAACAAGGTACAAATGACCTCTCCGAGCAGCACTGGCAGTCCCATGTTTAAATTTTCATCT
CCAATCGTAAAATCTACTGAGGCAAATGTACTACCTCCATCATCTATTGGATTTACATTTAGTGTGCCTG
TTGCAAAAACAGCAGAACTTTCTGGTTCTAGTAGTACTTTAGAACCAATTATAAGTAGTTCAGCTCATCA
TGTCACTACAGTGAACAGTACAAATTGTAAGAAGACACCACCTGAAGATTGTGAGGGTCCTTTTAGACCT
GCAGAAATCCTGAAAGAAGGAAGTGTTCTAGATATTCTGAAAAGCCCTGGTTTCGCATCGCCGAAGATAG
ATTCTGTTGCTGCTCAGCCCACCGCAACAAGCCCAGTAGTTTATACAAGACCAGCAATAAGTAGCTTTTC
TTCTAGTGGAATTGGGTTTGGGGAGAGTTTAAAAGCTGGGTCATCATGGCAGTGTGATACATGTCTACTC
CAGAACAAAGTTACAGACAACAAATGCATAGCCTGTCAAGCAGCAAAATTGTCACCCAGAGATACTGCTA
AACAGACTGGAATTGAAACACCAAATAAAAGTGGCAAAACAACTCTTTCTGCATCAGGGACAGGCTTTGG
AGACAAATTTAAACCAGTGATAGGCACTTGGGATTGTGATACCTGTTTAGTGCAAAATAAACCTGAAGCA
ATAAAATGTGTAGCCTGTGAAACACCGAAACCTGGAACTTGTGTGAAGCGAGCCCTTACATTGACAGTGG
TTTCGGAAAGTGCTGAGACTATGACTGCTTCATCTTCCAGCTGCACTGTAACCACTGGTACCTTAGGATT
TGGAGATAAATTCAAAAGGCCCATTGGATCTTGGGAGTGTTCAGTATGCTGTGTTTCTAATAATGCAGAA
GACAATAAGTGTGTGTCCTGTATGTCTGAGAAACCAGGAAGTTCAGTACCTGCTTCAAGTAGCAGCACTG
TACCTGTCTCTCTGCCTTCTGGAGGCTCTCTAGGATTGGAAAAGTTCAAGAAACCCGAGGGAAGCTGGGA
CTGTGAATTGTGCCTAGTGCAGAATAAGGCAGACTCTACCAAATGTTTGGCATGTGAAAGTGCAAAGCCA
GGCACAAAATCTGGGTTTAAAGGCTTTGACACATCTTCCTCATCTTCGAACTCAGCAGCCTCCTCATCCT
TCAAATTTGGTGTCTCATCATCCTCTTCTGGGCCTTCTCAGACTTTAACAAGCACTGGAAATTTTAAATT
TGGAGATCAGGGAGGATTCAAAATAGGTGTGTCATCCGATTCTGGGTCTATAAACCCCATGAGTGAAGGC
TTTAAATTTTCTAAACCAATAGGAGATTTTAAATTTGGAGTTTCATCTGAATCTAAGCCCGAAGAAGTTA
AAAAAGATAGTAAGAATGATAATTTTAAGTTTGGACTTTCTTCTGGTTTAAGCAACCCAGTTTCTTTAAC
TCCATTTCAATTTGGGGTATCTAATCTTGGACAGGAAGAAAAGAAAGAGGAACTGCCCAAATCTTCCTCT
GCAGGTTTTAGCTTTGGTACAGGTGTTATTAACTCCACCCCTGCTCCTGCTAACACCATAGTGACCTCTG
AGAACAAGAGCAGCTTCAACCTTGGAACCATAGAAACCAAGAGTGCTTCAGTGGCTCCTTTCACATGTAA
GACATCAGAAGCTAAAAAAGAAGAAATGCCTGCCACCAAAGGAGGATTCTCTTTTGGCAACGTGGAGCCT
GCCTCTCTGCCATCTGCCTCAGTGTTTGTTTTGGGAAGGACAGAAGAGAAACAGCAAGAGCCTGTCACTT
CTACTTCCCTAGTTTTTGGGAAGAAAGCTGACAATGAAGAGCCAAAGTGTCAACCAGTGTTTTCCTTTGG
GAATTCAGAGCAAACCAAAGATGAGAATTCTTCAAAGTCCACATTTAGTTTTAGTATGACAAAACCATCT
GAGAAGGAATCTGAACAGCCAGCAAAAGCCACTTTTGCCTTTGGAGCTCAAACTAGTACTACAGCTGATC
AAGGTGCAGCAAAGCCAGTTTTTAGTTTCTTGAACAACAGTTCCTCTAGTTCAAGTACACCAGCCACTTC
TGCTGGTGGTGGCATATTTGGTAGTTCCACCTCTTCCTCCAATCCACCTGTGGCTACCTTTGTGTTTGGA
CAGTCCAGCAATCCTGTGAGCAGCTCTGCCTTTGGTAACACTGCTGAATCCAGCACCTCTCAGTCTTTGC
TATTTTCTCAAGATAGCAAACTAGCAACCACATCCAGCACAGGTACAGCTGTCACCCCATTTGTCTTTGG
TCCAGGAGCCAGCAGTAATAATACTACCACCTCTGGTTTCGGCTTTGGAGCCACAACCACATCTAGCTCT
GCAGGATCCTCCTTTGTATTTGGAACTGGACCCTCAGCACCATCTGCCAGTCCAGCATTTGGTGCTAACC
AGACCCCAACATTTGGACAAAGTCAAGGTGCCAGCCAGCCCAATCCCCCAGGCTTTGGATCTATATCATC
TTCCACAGCATTATTTCCCACTGGTTCTCAGCCTGCACCACCTACTTTTGGGACAGTGTCAAGCAGTAGC
CAGCCCCCTGTGTTTGGACAGCAACCTAGTCAGTCTGCATTTGGCTCTGGAACAACTCCTAATTCTAGTT
CGGCTTTCCAGTTTGGCAGCAGCACTACAAATTTCAACTTCACAAACAACAGTCCATCAGGAGTGTTCAC
ATTTGGTGCAAATTCTAGCACACCTGCAGCCTCAGCCCAGCCTTCAGGCTCGGGGGGCTTTCCATTTAAC
CAGTCTCCAGCAGCATTTACAGTGGGGTCAAATGGGAAAAATGTGTTCTCTTCTTCTGGAACTTCATTCT
CTGGTCGCAAGATAAAGACTGCTGTTAGACGCAGGAAATAA

Translation (1506 aa):
MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFNKNEDVCSCST
DTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTASNYPDVLTRPSLHRSHLNFSM
LESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDNISTTSGFSSRASDKDITVSKNTSLPPLWSP
EAERSHSLSQHTATSSKKPAFNLSAFGTLSPSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRN
TPYQAPVRRQMKAKQLSAQSYGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDF
QAKREKVDSQYPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEERQGLTVLPKLISSSCAQAIIPSWPL
KVLRLQEMEVPVLPKISLPITSSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSS
PIVKSTEANVLPPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRP
AEILKEGSVLDILKSPGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGSSWQCDTCLL
QNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEA
IKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWECSVCCVSNNAE
DNKCVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKP
GTKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEG
FKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSS
AGFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEP
ASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPS
EKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVATFVFG
QSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSS
AGSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSS
QPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFN
QSPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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