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Report for CCDS77348.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77348.1 Public Homo sapiens 19 ZNF534 24 110 108 CCDS HistoryNCBI Gene:147658Re-query CCDS DB by CCDS ID:77348.1Re-query CCDS DB by GeneID:147658See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77348.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432303.6 ENSP00000409421.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432303.6Link to Ensembl Protein Viewer:ENSP00000409421.2Re-query CCDS DB by Nucleotide ID:ENST00000432303Re-query CCDS DB by Protein ID:ENSP00000409421
Original member Current member NCBI NM_001291369.4 NP_001278298.1 Accepted alive Link to Nucleotide Sequence:NM_001291369.4Link to Protein Sequence:NP_001278298.1Re-query CCDS DB by Nucleotide ID:NM_001291369Re-query CCDS DB by Protein ID:NP_001278298Link to BLAST:NP_001278298.1

Chromosomal Locations for CCDS 77348.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52431475 52431489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52433955 52434081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52451187 52451497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGGCCCTTACTCAGGGGCAATTGTCATTCAGCGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAAT
GCCTGGACCCTGGGCAGAAAGCTTTATACAGGGACGTGATGTTAGAGAACTACAGGAACCTGGTCTCCCT
AGATTTTTCACTTCTGGCCTGGGACGCGCGCGTCTTCAGGGTGGAAGCCTGGCGCGCGTCCGGAGGTGCT
GAGGAGCCAACCGGCCCAAACTTTGTGGGAAATGACTCCCCTCTGCCCTCGCCCCTCGCTCTGCTACCAT
TTCCTTCCGTTTCTGCTTCGCTTGGCGATGCAAAACGCGCGAGGCTCACGGCAGAGGGCCGAGGCCACGG
GACTCTCAGGGCCGGGCCCGCCCCTCGGCCGCGCAGTGCGGCGCCGCACGCCCCGGACGCTGTCCAGCGT
TGGCCGCCTGAGCAGAGGCTGCCGCGGAGCTAA

Translation (150 aa):
MALTQGQLSFSDVAIEFSQEEWKCLDPGQKALYRDVMLENYRNLVSLDFSLLAWDARVFRVEAWRASGGA
EEPTGPNFVGNDSPLPSPLALLPFPSVSASLGDAKRARLTAEGRGHGTLRAGPAPRPRSAAPHAPDAVQR
WPPEQRLPRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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