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Report for CCDS14347.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14347.1 Public Homo sapiens X XAGE3 24 110 108 CCDS HistoryNCBI Gene:170626Re-query CCDS DB by CCDS ID:14347.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14347.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000346279.4 ENSP00000303061.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000346279.4Link to Ensembl Protein Viewer:ENSP00000303061.3Re-query CCDS DB by Nucleotide ID:ENST00000346279Re-query CCDS DB by Protein ID:ENSP00000303061
Original member Current member EBI ENST00000375491.7 ENSP00000364640.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375491.7Link to Ensembl Protein Viewer:ENSP00000364640.3Re-query CCDS DB by Nucleotide ID:ENST00000375491Re-query CCDS DB by Protein ID:ENSP00000364640
Original member Current member NCBI NM_130776.2 NP_570132.1 Accepted alive Link to Nucleotide Sequence:NM_130776.2Link to Protein Sequence:NP_570132.1Re-query CCDS DB by Nucleotide ID:NM_130776Re-query CCDS DB by Protein ID:NP_570132Link to BLAST:NP_570132.1
Original member Current member NCBI NM_133179.3 NP_573440.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133179.3Link to Protein Sequence:NP_573440.1Re-query CCDS DB by Nucleotide ID:NM_133179Re-query CCDS DB by Protein ID:NP_573440Link to BLAST:NP_573440.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_570132.1 111 Q8WTP9 111 100% 0 0
NP_573440.1 111 Q8WTP9 111 100% 0 0

Chromosomal Locations for CCDS 14347.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 52862618 52862640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 52864775 52864900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 52866433 52866538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 52867053 52867133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (336 nt):
ATGATTTGGCGAGGAAGATCAACATATAGGCCTAGGCCGAGGAGAAGTGTACCACCTCCTGAGCTGATTG
GGCCTATGCTGGAGCCCGGTGATGAGGAGCCTCAGCAAGAGGAACCACCAACTGAAAGTCGGGATCCTGC
ACCTGGTCAGGAGAGAGAAGAAGATCAGGGTGCAGCTGAGACTCAAGTGCCTGACCTGGAAGCTGATCTC
CAGGAGCTGTCTCAGTCAAAGACTGGGGGTGAATGTGGAAATGGTCCTGATGACCAGGGGAAGATTCTGC
CAAAATCAGAACAATTTAAAATGCCAGAAGGAGGTGACAGGCAACCACAGGTTTAA

Translation (111 aa):
MIWRGRSTYRPRPRRSVPPPELIGPMLEPGDEEPQQEEPPTESRDPAPGQEREEDQGAAETQVPDLEADL
QELSQSKTGGECGNGPDDQGKILPKSEQFKMPEGGDRQPQV


Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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