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Report for CCDS81694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81694.1 Public Homo sapiens 12 ATP5MC2 24 110 108 CCDS HistoryNCBI Gene:517Re-query CCDS DB by CCDS ID:81694.1Re-query CCDS DB by GeneID:517See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81694.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338662.6 ENSP00000340315.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338662.6Link to Ensembl Protein Viewer:ENSP00000340315.6Re-query CCDS DB by Nucleotide ID:ENST00000338662Re-query CCDS DB by Protein ID:ENSP00000340315
Original member Current member EBI ENST00000394349.9 ENSP00000377878.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394349.9Link to Ensembl Protein Viewer:ENSP00000377878.5Re-query CCDS DB by Nucleotide ID:ENST00000394349Re-query CCDS DB by Protein ID:ENSP00000377878
Original member Current member EBI ENST00000549164.5 ENSP00000447317.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000549164.5Link to Ensembl Protein Viewer:ENSP00000447317.1Re-query CCDS DB by Nucleotide ID:ENST00000549164Re-query CCDS DB by Protein ID:ENSP00000447317
Original member Current member EBI ENST00000552242.5 ENSP00000448801.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000552242.5Link to Ensembl Protein Viewer:ENSP00000448801.2Re-query CCDS DB by Nucleotide ID:ENST00000552242Re-query CCDS DB by Protein ID:ENSP00000448801
Original member Current member NCBI NM_001330269.2 NP_001317198.1 Accepted alive Link to Nucleotide Sequence:NM_001330269.2Link to Protein Sequence:NP_001317198.1Re-query CCDS DB by Nucleotide ID:NM_001330269Re-query CCDS DB by Protein ID:NP_001317198Link to BLAST:NP_001317198.1
Original member Current member NCBI NM_001369753.1 NP_001356682.1 Accepted alive Link to Nucleotide Sequence:NM_001369753.1Link to Protein Sequence:NP_001356682.1Re-query CCDS DB by Nucleotide ID:NM_001369753Re-query CCDS DB by Protein ID:NP_001356682Link to BLAST:NP_001356682.1
Original member Current member NCBI NM_001369754.1 NP_001356683.1 Accepted alive Link to Nucleotide Sequence:NM_001369754.1Link to Protein Sequence:NP_001356683.1Re-query CCDS DB by Nucleotide ID:NM_001369754Re-query CCDS DB by Protein ID:NP_001356683Link to BLAST:NP_001356683.1
Original member Current member NCBI NM_001369755.1 NP_001356684.1 Accepted alive Link to Nucleotide Sequence:NM_001369755.1Link to Protein Sequence:NP_001356684.1Re-query CCDS DB by Nucleotide ID:NM_001369755Re-query CCDS DB by Protein ID:NP_001356684Link to BLAST:NP_001356684.1
Original member Current member NCBI NM_005176.7 NP_005167.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005176.7Link to Protein Sequence:NP_005167.3Re-query CCDS DB by Nucleotide ID:NM_005176Re-query CCDS DB by Protein ID:NP_005167Link to BLAST:NP_005167.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317198.1 141 Q06055-1 141 100% 0 0
NP_001356682.1 141 Q06055-1 141 100% 0 0
NP_001356683.1 141 Q06055-1 141 100% 0 0
NP_001356684.1 141 Q06055-1 141 100% 0 0
NP_005167.3 141 Q06055-1 141 100% 0 0

Chromosomal Locations for CCDS 81694.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 53665314 53665428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53669148 53669341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53669871 53669948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53672576 53672614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (426 nt):
ATGTTCGCCTGCTCCAAGTTTGTCTCCACTCCCTCCTTGGTCAAGAGCACCTCACAGCTGCTGAGCCGTC
CGCTATCTGCAGTGGTGCTGAAACGACCGGAGATACTGACAGATGAGAGCCTCAGCAGCTTGGCAGTCTC
ATGTCCCCTTACCTCACTTGTCTCTAGCCGCAGCTTCCAAACCAGCGCCATTTCAAGGGACATCGACACA
GCAGCCAAGTTCATTGGAGCTGGGGCTGCCACAGTTGGGGTGGCTGGTTCTGGGGCTGGGATTGGAACTG
TGTTTGGGAGCCTCATCATTGGTTATGCCAGGAACCCTTCTCTGAAGCAACAGCTCTTCTCCTACGCCAT
TCTGGGCTTTGCCCTCTCGGAGGCCATGGGGCTCTTTTGTCTGATGGTAGCCTTTCTCATCCTCTTTGCC
ATGTGA

Translation (141 aa):
MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDT
AAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA
M


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 Genome Browser Links:   Ensembl Genome Browser
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