CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS35948.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
35948.1 |
Public |
Mus musculus |
10 |
Adarb1 |
23 |
108 |
98 |
|
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 35948.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000098374.8 |
ENSMUSP00000095976.2 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000105406.7 |
ENSMUSP00000101046.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001024837.2 |
NP_001020008.1 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001020008.1 |
711 |
Q91ZS8-1 |
711 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 35948.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2136 nt): ATGGATATAGAAGATGAAGAGAATATGAGTTCCAGCAGCACTGATATTAAAGAAAACCGCAATCTGGACA ACATGCCCCCCAAGGACAGCAGCACACCTGGGCCTGGCGAGGGTATTCCGCTCTCCAACGGGGGTGGTGG TAGCACCAGCAGGAAGCGGCCCCTGGAGGAGGGCAGCAATGGTCACTCCAAGTACCGCCTGAAGAAGCGA AGGAAAACACCAGGGCCTGTTCTGCCCAAGAACGCCCTGATGCAGCTGAACGAGATCAAACCTGGCTTAC AGTACATGCTGCTGTCCCAGACAGGACCCGTGCATGCACCTCTGTTTGTCATGTCTGTGGAGGTAAACGG GCAGGTTTTTGAGGGCTCTGGCCCTACAAAGAAAAAGGCAAAACTCCATGCTGCTGAGAAGGCCCTGAGG TCTTTTGTCCAGTTTCCCAACGCCTCCGAGGCCCACCTAGCCATGGGAAGGACCCTCTCTGTGAACACAG ACTTCACGTCTGACCAGGCTGACTTCCCTGACACACTCTTCAATGGCTTCGAGACTCCAGACAAGTCAGA GCCACCCTTCTACGTAGGCTCCAACGGGGATGACTCGTTCAGCTCAAGTGGAGATGTCAGCCTATCGGCC TCCCCAGTGCCTGCCAGCCTTACCCAGCCTCCTCTGCCCATCCCACCACCATTCCCACCCCCAAGTGGGA AGAATCCCGTGATGATCTTGAATGAGCTACGCCCAGGGCTGAAGTATGACTTCCTCTCTGAGAGTGGGGA GAGCCACGCCAAGAGCTTCGTCATGTCCGTGGTGGTAGATGGCCAGTTCTTTGAGGGCTCAGGAAGAAAC AAGAAGCTTGCCAAGGCCCGGGCTGCACAGTCTGCCTTGGCTACTGTCTTCAATTTGCACTTGGACCAAA CACCATCTCGCCAGCCTGTCCTCAGTGAGGGTCTTCAGTTGCATTTGCCACAGGTATTGGCAGATGCTGT CTCCCGCCTGGTCCTGGGTAAGTTCAGTGACCTGACAGACAACTTTTCCTCCCCTCATGCACGAAGGAAA GTGCTCTCTGGAGTAGTGATGACCACAGGTACAGATGTCAAAGATGCCAAGGTGATAAGTGTTTCGACAG GGACGAAGTGTATCAACGGTGAATACATGAGTGACCGTGGCCTCGCACTCAATGACTGCCACGCAGAGAT AATCTCCCGAAGGTCCCTGCTCAGGTTTCTTTATGCACAGCTCGAGCTTTATTTAAATAACAAAGAAGAC CAGAAAAAGTCCATATTTCAGAAGTCAGAGCGGGGTGGGTTCCGGCTGAAGGATACCGTGCAGTTCCACC TGTACATCAGCACCTCGCCCTGCGGAGACGCCAGAATATTCTCTCCCCACGAGCCCGTGCTAGAGGGTAT GACGCCAGACTCTCACCAGCTGACAGAACCAGCAGATAGACATCCGAATCGCAAAGCAAGGGGACAGCTA CGGACGAAAATAGAGTCTGGCGAGGGGACAATCCCTGTGCGCTCAAATGCCAGCATCCAGACCTGGGACG GGGTGCTGCAGGGGGAACGGCTGCTCACCATGTCCTGCAGTGACAAGATAGCACGCTGGAACGTGGTGGG CATCCAGGGGTCCCTGCTCAGCATTTTCGTGGAACCCATCTACTTCTCCAGCATCATCTTGGGCAGCCTG TACCACGGGGACCACCTCTCCAGGGCCATGTACCAGCGGATCTCCAACATAGAGGACCTGCCACCGCTCT ACACTCTCAACAAGCCCCTGCTCAGCGGCATCAGCAATGCAGAGGCACGGCAGCCAGGGAAGGCACCCAA CTTCAGTGTCAACTGGACAGTGGGTGACGCCACCATTGAGGTCATCAATGCCACAACAGGGAAGGATGAG CTTGGCCGCCCATCCCGCCTGTGTAAGCACGCGCTGTACTGTCGCTGGATGCGTGTACACGGCAAGGTTC CCCCCCACCTGCTGCGCACCAAGATCACTAAGCCTACCACATACCACGAGTCCAAGCTGGCAGCGAGGGA GTACCAGGCTGCCAAGGCCCGTCTGTTCACTGCCTTCATCAAGGCGGGGCTGGGCGCCTGGGTGGAGAAG CCCACAGAGCAGGACCAGTTCTCCTTCACTCCCTGA
Translation (711 aa): MDIEDEENMSSSSTDIKENRNLDNMPPKDSSTPGPGEGIPLSNGGGGSTSRKRPLEEGSNGHSKYRLKKR RKTPGPVLPKNALMQLNEIKPGLQYMLLSQTGPVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALR SFVQFPNASEAHLAMGRTLSVNTDFTSDQADFPDTLFNGFETPDKSEPPFYVGSNGDDSFSSSGDVSLSA SPVPASLTQPPLPIPPPFPPPSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRN KKLAKARAAQSALATVFNLHLDQTPSRQPVLSEGLQLHLPQVLADAVSRLVLGKFSDLTDNFSSPHARRK VLSGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYAQLELYLNNKED QKKSIFQKSERGGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMTPDSHQLTEPADRHPNRKARGQL RTKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSL YHGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDATIEVINATTGKDE LGRPSRLCKHALYCRWMRVHGKVPPHLLRTKITKPTTYHESKLAAREYQAAKARLFTAFIKAGLGAWVEK PTEQDQFSFTP
|