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Report for CCDS44658.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
44658.1 |
Public |
Homo sapiens |
11 |
CARNS1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:57571](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:44658.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:57571](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 44658.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000307823.7 |
ENSP00000308268.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000307823.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000308268.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000307823](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000308268](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394578.1 |
NP_001381507.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394578.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381507.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394578](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381507](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381507.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394579.1 |
NP_001381508.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394579.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381508.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394579](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381508](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381508.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_020811.2 |
NP_065862.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_020811.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_065862.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_020811](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_065862](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_065862.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 44658.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2484 nt): ATGCTCCTTTGCCTGTCCCCTGCTTGGCTGATGAAGGTGCCAGCACCCGGGCAGCCGGGTGAGGCAGCCC TGCTAGTCTCCAAGGCTGTGAGCTTCCACCCTGGGGGCCTGACATTCCTGGATGACTTTGTCCCCCCGCG CCGTGCCACCTACTTTTTGGCAGGCCTGGGCCTGGGGCCTGGCCGGGGCCGAGAGGCAGCAGAACTCGCC CGTGACCTGACCTGCCCCACAGGAGCTTCGGCTGAGCTGGCCCGGCTGCTGGAGGACCGGCTGCTGACAA GGCAGTTGCTGGCCCAGCAGGGTGGTGTGGCTGTGCCAGCAACCCTGGCTTTCACCTACAAGCCGCCGGG GCTGCTGCGGGGAGGGGATGCCAGCCTAGGGCTACGGCTGGTGGAGCTGAGTGGCAAAGAGGGCCAGGAG ACGCTGGTGAAAGAGGAAGTGGAGGCTTTTCTGCGCTCCGAGGCCCTGGGTGATATCCTGCAGGTAGCTG TGAAGCTCAGTGGCTGGCGCTGGCGGGGGCGGCAGGCATGGCGTCTGCACCCGCGGGCAGAGCTGGGTGC AGTGGTGGACACAGTGCTGGCGCTGCTGGAGAAGCTGGAGGAGGAGGAGAGTGTCCTGGTGGAGGCTGTG TACCCACCTGCCCAGCTGCCCTGCTCAGATGGTCCTTCACCCGGCCCCGGCCTGGCCGTGCGAATCTGTG CTGTGGTGTGTCGGACACAGGGTGATAGGCCACTGCTGAGCAAGGTGGTGTGCGGCGTGGGCCGCGGGGA CCGCCCTCTACGGCACCACAACTCCCTGCCGAGGACGCTGGAGGTGGCGCTGGCCCAGTGCGGCCTGGGC GAGGAGGCGCAGGTGGCGGCTGTGCGGCAGCGCGTCAAGGCGGCGGCCGAGGCCGCGCTGGCCGCCGTGC TGGCTCTGGAGGCCGGCCTGAGTGCCGAGCAGCGCGGCGGGCGCCGGGCGCACACGGACTTCCTGGGCGT GGATTTCGCGCTGACAGCGGCCGGCGGCGTGCTGACCCCAGTGGCCCTGGAGCTGAACGGCGGCCTGTGT CTGGAGGCGTGCGGCGCGCTGGAGGGGCTGTGGGCCGCGCCGCGGCTGGGGCCGGCGGCCGACGAGGCGG TGGCGGCGCCGCTGGTGGAGACCATGCTTCGGCGGTCGGCGCGCTGCCTCATGGAGGGAAAACAGCTGCT GGTGGTCGGCGCTGGCGGCGTCAGCAAGAAGTTCGTGTGGGAGGCGGCGCGCGACTACGGGCTCCAGCTG CACCTCGTGGAGTCAGACCCCAACCACTTTGCATCCCAGTTGGTACAGACCTTCATCCACTTTGACATGA CAGAGCACCGGAGGGATGAGGAGAACGCACGGCTGCTGGCAGAGTTGGTGCGGGCTCGCGGCCTCAAGCT AGATGGCTGCTTCTCCTACTGGGATGACTGCCTGGTGCTCACAGCCCTGCTCTGCCAGGAGCTAGGTCTG CCCTGCAGCTCCCCAGCTGCCATGCGCCTGGCTAAGCAGAAGAGCCTCACCCAGCTGCACCTGTTGCACC ACCATGGCCCACCCTGGCCTGCGCCCTCCCTCCATGCTGTGCCCTGCTGCCCACTGGAGAGTGAGGCTGA TGTGGAGAGGGCCGTGCACCAGGTACCCCTGCCAGGTGTCATGAAGCTGGAGTTCGGGGCAGGTGCAGTG GGTGTCCGGCTGGTAGAGGATGCGCCACAGTGCCATGAGCACTTTTCCCGGATTACCCGAGACTTGCAGG GCGAGGCCGACCACCCAGGCATTGGGCTGGGCTGGGGCAATGCCATGCTGCTGATGGAGTTTGTGGAGGG CACCGAGCACGACGTGGACCTGGTGTTGTTTGGTGGGCGGTTGCTGGCTGCCTTTGTCTCCGACAATGGC CCTACGAGGCTGCCTGGCTTCACTGAGACGGCGGCCTGCATGCCCACCGGGCTGGCACCAGAGCAGGAGG CACAGATGGTTCAGGCAGCCTTCCGCTGTTGCCTGGGCTGCGGGTTGCTCGATGGAGTCTTCAACGTGGA GCTCAAGCTGACCGGGGCTGGGCCTCGGCTTATCGAGATCAACCCCCGCATGGGTGGCTTCTACCTGCGT GATTGGATCCTGGAGCTCTATGGTGTTGACCTGCTGCTGGCTGCTGTTATGGTGGCCTGTGGCTTGCGTC CTGCCCTGCCCACCCGCCCACGTGCTCGTGGCCATCTGGTGGGCGTCATGTGCCTTGTGTCCCAGCACCT GCAGGCCCTGAGTTCCACCGCCAGCCGTGAGACCCTGCAGGCCCTGCACGACCGTGGACTGCTACGCCTC AATCTGCTGGAGGAGGCCCTGGTGCCTGGCGAGTATGAGGAGCCCTACTGCAGTGTGGCCTGTGCCGGAC CCAGCCCCACCGAGGCCCGTCTCCGCCTGCTGGGCCTCTGCCAGGGCCTGGGCATCGATGGGCCCAGCTA CCCTGTTGCCCACTTCCTGTCTCACTTCAAATAG
Translation (827 aa): MLLCLSPAWLMKVPAPGQPGEAALLVSKAVSFHPGGLTFLDDFVPPRRATYFLAGLGLGPGRGREAAELA RDLTCPTGASAELARLLEDRLLTRQLLAQQGGVAVPATLAFTYKPPGLLRGGDASLGLRLVELSGKEGQE TLVKEEVEAFLRSEALGDILQVAVKLSGWRWRGRQAWRLHPRAELGAVVDTVLALLEKLEEEESVLVEAV YPPAQLPCSDGPSPGPGLAVRICAVVCRTQGDRPLLSKVVCGVGRGDRPLRHHNSLPRTLEVALAQCGLG EEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQRGGRRAHTDFLGVDFALTAAGGVLTPVALELNGGLC LEACGALEGLWAAPRLGPAADEAVAAPLVETMLRRSARCLMEGKQLLVVGAGGVSKKFVWEAARDYGLQL HLVESDPNHFASQLVQTFIHFDMTEHRRDEENARLLAELVRARGLKLDGCFSYWDDCLVLTALLCQELGL PCSSPAAMRLAKQKSLTQLHLLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVPLPGVMKLEFGAGAV GVRLVEDAPQCHEHFSRITRDLQGEADHPGIGLGWGNAMLLMEFVEGTEHDVDLVLFGGRLLAAFVSDNG PTRLPGFTETAACMPTGLAPEQEAQMVQAAFRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLR DWILELYGVDLLLAAVMVACGLRPALPTRPRARGHLVGVMCLVSQHLQALSSTASRETLQALHDRGLLRL NLLEEALVPGEYEEPYCSVACAGPSPTEARLRLLGLCQGLGIDGPSYPVAHFLSHFK
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