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Report for CCDS45333.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45333.1 Public Homo sapiens 15 WHAMM 24 110 108 CCDS HistoryNCBI Gene:123720Re-query CCDS DB by CCDS ID:45333.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45333.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286760.5 ENSP00000286760.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286760.5Link to Ensembl Protein Viewer:ENSP00000286760.4Re-query CCDS DB by Nucleotide ID:ENST00000286760Re-query CCDS DB by Protein ID:ENSP00000286760
Original member Current member NCBI NM_001080435.3 NP_001073904.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080435.3Link to Protein Sequence:NP_001073904.1Re-query CCDS DB by Nucleotide ID:NM_001080435Re-query CCDS DB by Protein ID:NP_001073904Link to BLAST:NP_001073904.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073904.1 809 Q8TF30 809 100% 0 0

Chromosomal Locations for CCDS 45333.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82809727 82810335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82813103 82813276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82816692 82816842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82817920 82818089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82819323 82819488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82823100 82823287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82826410 82826496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82826751 82826846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82830599 82831079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82833229 82833536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2430 nt):
ATGGAGGACGAGCAGCCTGACAGCCTGGAGGGCTGGGTGCCGGTCCGGGAGGGCCTCTTCGCCGAGCCCG
AGAGGCACCGGCTGCGCTTCCTGGTGGCCTGGAACGGCGCGGAGGGCAAGTTCGCTGTGACTTGTCACGA
CCGTACCGCGCAGCAGCGGCGGCTGCGCGAGGGGGCCCGGTTGGGGCCCGAGCCCGAGCCCAAGCCTGAG
GCCGCCGTCTCCCCGTCCAGCTGGGCCGGCCTGCTCTCGGCCGCGGGGCTCCGCGGCGCGCACCGGCAGT
TGGCGGCGCTGTGGCCGCCTCTGGAGCGCTGCTTCCCGCGGCTGCCGCCGGAGCTGGACGTGGGCGGCGG
CGGGGCCTGGGGTCTGGGGCTCGGGCTGTGGGCGCTGCTGTGGCCGACGCGCGCGGGTCCCGGCGAGGCG
GCGCTGCAGGAGCTGTGCGGGCAGCTGGAACGCTATCTGGGCGCGGCGGCCGACGGCTGCGGCGGCGCCA
CAGTGCGCGACGCACTCTTCCCGGCTGAGGGCGGCGCGGCCGACTGCGAAAGCCCGCGCGAGTTCCGGGA
GCGGGCCTTGCGCGCGCGGTGGGTCGAGGCGGACGCGCGGCTGCGCCAGGTTATTCAAGGACACGGAAAA
GCCAACACCATGGTAGCATTAATGAACGTTTACCAAGAGGAAGATGAAGCATACCAGGAATTGGTTACCG
TGGCAACCATGTTCTTCCAGTACTTATTGCAGCCATTTAGGGCTATGCGAGAAGTTGCAACTTTATGTAA
GCTTGATATTTTGAAGTCTTTGGATGAGGATGACCTAGGTCCTAGAAGGGTAGTTGCCCTGGAGAAAGAA
GCTGAAGAATGGACCAGACGGGCTGAAGAAGCTGTCGTCTCTATTCAGGATATCACAGTGAATTATTTTA
AGGAGACAGTAAAAGCATTAGCAGGAATGCAGAAAGAAATGGAACAGGATGCGAAGAGATTTGGTCAGGC
TGCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTCAGCTAATGCTAGCTCGAGAGACTCTGCAACTC
ATGAGAGCGAAAGAGTTGTGTTTAAATCACAAAAGAGCTGAAATTCAGGGAAAGATGGAAGATCTTCCAG
AACAAGAAAAAAATACAAATGTTGTAGATGAATTAGAAATACAATTTTATGAAATTCAATTAGAACTATA
TGAAGTTAAATTTGAGATATTAAAAAACGAAGAAATACTGCTTACTACACAGTTGGACTCTCTTAAAAGA
CTTATAAAAGAAAAACAAGATGAAGTTGTCTATTACGATCCATGTGAAAATCCAGAGGAACTTAAAGTCA
TTGACTGTGTGGTGGGGCTGCAGGATGATAAGAATTTGGAAGTGAAAGAACTCAGAAGGCAGTGCCAGCA
GCTGGAGTCTAAACGGGGCAGGATCTGTGCCAAAAGAGCCTCTCTCCGGAGTAGAAAGGATCAGTGCAAA
GAAAATCATCGGTTCAGATTGCAACAGGCTGAAGAAAGCATAAGATACTCTCGTCAGCATCACAGTATTC
AGATGAAAAGAGACAAGATAAAAGAAGAGGAGCAAAAGAAAAAAGAATGGATCAACCAAGAACGTCAAAA
AACACTCCAACGATTGAGATCATTTAAAGATAAACGCCTAGCTCAATCTGTCCGAAACACCTCTGGCTCA
GAACCTGTGGCTCCAAACCTGCCAAGTGATCTTTCCCAGCAGATGTGCTTGCCAGCTTCCCACGCGGTGT
CAGTAATTCACCCGTCCTCTAGGAAAACTAGAGGTGTTCCCCTATCGGAAGCTGGTAATGTGAAAAGCCC
CAAGTGTCAAAACTGTCATGGAAATATCCCTGTCCAGGTTTTTGTTCCAGTTGGTGATCAAACACATTCC
AAATCCAGTGAGGAATTGTCACTGCCACCACCTCCTCCTCCTCCACCACCACCACCGCCGCCACCGCCGC
CCCCACCCCCTCCTCTCCGTGCTCTGTCCTCATCCTCTCAAGCTGCAACTCATCAGAACTTAGGCTTCCG
GGCTCCAGTGAAAGATGACCAGCCACGTCCTCTAGTGTGCGAATCACCTGCTGAGCGACCACGTGACTCC
TTGGAAAGTTTTTCATGTCCAGGATCTATGGATGAAGTGTTGGCCTCCTTAAGGCATGGCAGAGCTCCTC
TCCGGAAGGTGGAAGTGCCGGCGGTGCGCCCTCCCCACGCCTCAATCAATGAGCACATTCTGGCTGCCAT
AAGGCAAGGGGTCAAACTGAAGAAAGTTCACCCTGATCTTGGCCCAAACCCCAGCAGCAAACCAACCAGC
AACAGACGCACCAGTGACCTTGAGAGGAGCATCAAGGCTGCGCTCCAGAGAATCAAGAGGGTGTCTGCTG
ACTCTGAGGAGGACAGTGATGAGCAGGACCCTGGCCAGTGGGATGGTTAG

Translation (809 aa):
MEDEQPDSLEGWVPVREGLFAEPERHRLRFLVAWNGAEGKFAVTCHDRTAQQRRLREGARLGPEPEPKPE
AAVSPSSWAGLLSAAGLRGAHRQLAALWPPLERCFPRLPPELDVGGGGAWGLGLGLWALLWPTRAGPGEA
ALQELCGQLERYLGAAADGCGGATVRDALFPAEGGAADCESPREFRERALRARWVEADARLRQVIQGHGK
ANTMVALMNVYQEEDEAYQELVTVATMFFQYLLQPFRAMREVATLCKLDILKSLDEDDLGPRRVVALEKE
AEEWTRRAEEAVVSIQDITVNYFKETVKALAGMQKEMEQDAKRFGQAAWATAIPRLEKLQLMLARETLQL
MRAKELCLNHKRAEIQGKMEDLPEQEKNTNVVDELEIQFYEIQLELYEVKFEILKNEEILLTTQLDSLKR
LIKEKQDEVVYYDPCENPEELKVIDCVVGLQDDKNLEVKELRRQCQQLESKRGRICAKRASLRSRKDQCK
ENHRFRLQQAEESIRYSRQHHSIQMKRDKIKEEEQKKKEWINQERQKTLQRLRSFKDKRLAQSVRNTSGS
EPVAPNLPSDLSQQMCLPASHAVSVIHPSSRKTRGVPLSEAGNVKSPKCQNCHGNIPVQVFVPVGDQTHS
KSSEELSLPPPPPPPPPPPPPPPPPPPPLRALSSSSQAATHQNLGFRAPVKDDQPRPLVCESPAERPRDS
LESFSCPGSMDEVLASLRHGRAPLRKVEVPAVRPPHASINEHILAAIRQGVKLKKVHPDLGPNPSSKPTS
NRRTSDLERSIKAALQRIKRVSADSEEDSDEQDPGQWDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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