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Report for CCDS92457.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92457.1 Public Homo sapiens 18 KATNAL2 24 110 108 CCDS HistoryNCBI Gene:83473Re-query CCDS DB by CCDS ID:92457.1Re-query CCDS DB by GeneID:83473See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92457.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000588433.6 ENSP00000464779.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588433.6Link to Ensembl Protein Viewer:ENSP00000464779.2Re-query CCDS DB by Nucleotide ID:ENST00000588433Re-query CCDS DB by Protein ID:ENSP00000464779
Original member Current member NCBI NM_001353903.1 NP_001340832.1 Accepted alive Link to Nucleotide Sequence:NM_001353903.1Link to Protein Sequence:NP_001340832.1Re-query CCDS DB by Nucleotide ID:NM_001353903Re-query CCDS DB by Protein ID:NP_001340832Link to BLAST:NP_001340832.1

Chromosomal Locations for CCDS 92457.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 47058236 47058352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47059556 47059654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47062972 47063070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47063284 47063361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47067021 47067119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47069220 47069283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47069482 47069600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47075277 47075368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47077351 47077461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47099243 47099405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47100254 47100356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 47100866 47101005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGATGAACGACAGTTGTCAAAATCTTCCCAAGATCAATCAGCAGAGGCCCCGGTCCAAAACCACAGCGG
GGAAGACAGGGGACACCAAATCGCTCAATAAGGAGCATCCTAATCAGGAGGTAGTTGATAACACTCGCCT
GGAAAGTGCCAACTTCGGCCTACATATATCAAGAATCCGTAAAGACAGTGGAGAGGAAAATGCCCACCCA
CGAAGAGGCCAAATCATTGACTTCCAAGGGCTGCTCACAGATGCCATCAAGGGAGCAACCAGTGAACTTG
CCTTGAACACCTTCGACCATAATCCAGACCCCTCAGAACGACTGCTGAAACCTCTGAGTGCATTTATTGG
CATGAACAGTGAGATGCGAGAATTGGCAGCCGTGGTGAGCCGGGACATTTATCTCCATAATCCAAACATA
AAGTGGAATGACATTATTGGACTTGATGCAGCCAAGCAGTTAGTCAAAGAAGCTGTTGTGTATCCTATAA
GGTATCCACAGCTATTTACAGGAATTCTTTCTCCCTGGAAAGGACTACTGCTGTACGGCCCTCCAGGTAC
AGGAAAGACTTTACTGGCCAAAGCTGTGGCCACTGAATGTAAAACAACCTTCTTTAACATTTCTGCATCC
ACCATTGTCAGCAAATGGAGAGGGGATTCAGAAAAACTCGTTCGGGTGTTATTTGAGCTTGCCCGCTACC
ACGCCCCATCCACGATCTTCCTGGACGAGCTGGAGTCGGTGATGAGTCAGAGAGGCACAGCTTCTGGGGG
AGAACATGAAGGAAGCCTGCGGATGAAGACAGAGTTACTGGTGCAGATGGATGGGCTGGCACGCTCAGAA
GATCTCGTATTTGTCTTAGCAGCTTCTAACCTGCCGTGGGAGCTGGACTGTGCCATGTTACGCCGCCTGG
AGAAGAGGATTCTGGTCGATCTCCCCAGCCGGGAGGCCAGGCAGGCCATGATCTACCACTGGCTGCCTCC
TGTGAGCAAGAGCAGGGCCTTGGAGCTGCACACAGAGCTGGAGTACAGTGTGCTGAGCCAGGAGACTGAG
GGCTACTCAGGCTCAGATATTAAGCTCGTCTGCAGGGAAGCAGCCATGCGGCCCGTGAGGAAGATCTTTG
ATGCACTTGAAAATCACCAGTCAGAAAGCAGCGACTTACCCAGGATCCAGTTGGATATAGTAACCACTGC
CGACTTTCTGGATGTGCTAACTCACACCAAGCCCTCCGCAAAGAATCTGGCTCAGAGATACTCAGACTGG
CAAAGAGAGTTCGAGTCTGTCTGA

Translation (427 aa):
MMNDSCQNLPKINQQRPRSKTTAGKTGDTKSLNKEHPNQEVVDNTRLESANFGLHISRIRKDSGEENAHP
RRGQIIDFQGLLTDAIKGATSELALNTFDHNPDPSERLLKPLSAFIGMNSEMRELAAVVSRDIYLHNPNI
KWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISAS
TIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSE
DLVFVLAASNLPWELDCAMLRRLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETE
GYSGSDIKLVCREAAMRPVRKIFDALENHQSESSDLPRIQLDIVTTADFLDVLTHTKPSAKNLAQRYSDW
QREFESV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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