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Report for CCDS16751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16751.1 Public Mus musculus 2 Atrn 23 108 98 CCDS HistoryNCBI Gene:11990Re-query CCDS DB by CCDS ID:16751.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16751.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028781.8 ENSMUSP00000028781.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028781.8Link to Ensembl Protein Viewer:ENSMUSP00000028781.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000028781Re-query CCDS DB by Protein ID:ENSMUSP00000028781
Original member Current member NCBI NM_009730.3 NP_033860.2 Accepted alive Link to Nucleotide Sequence:NM_009730.3Link to Protein Sequence:NP_033860.2Re-query CCDS DB by Nucleotide ID:NM_009730Re-query CCDS DB by Protein ID:NP_033860Link to BLAST:NP_033860.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033860.2 1428 Q9WU60 1428 100% 0 0

Chromosomal Locations for CCDS 16751.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 130906561 130906967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130933386 130933469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130935524 130935637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130944882 130945010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130946014 130946219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130947559 130947727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130957021 130957111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130957905 130958148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130960385 130960568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130961520 130961674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130964844 130964928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130970005 130970225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130972225 130972346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130973377 130973515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130975878 130976068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130979930 130980149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130981904 130982089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130982595 130982828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130986718 130986855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130994121 130994214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130995031 130995083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130999146 130999240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131002762 131002840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131004448 131004605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131013607 131013668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131018613 131018691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131020941 131021048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131023002 131023116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131025817 131025941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4287 nt):
ATGGTGGCGGTGGCGGCGGCGGCGGCGACTGAGGCGCGGCTGAGGGGGAGCACGACGGCGACAGCAGCGC
CTGCGGGCAGGAAGGGCAGGCAGCACCGACCCTGCACCGCGACAGGGGCCTGGAGGCCGGGACCGCGCGC
CCGGCTGTGTCTACCGCGGGTGCTGTCGCGGGCGCTGCCCCCGCCGCCGCTGCTGCCGCTGCTCTTTTCG
CTGCTGCTGCTGCCGCTGCCCCGGGAGGCCGAGGCCGCTGCGGTGGCGGCGGCGGTGTCGGGCTCGGCCG
CAGCCGAGGCCAAGGAATGTGACCGGCCGTGTGTCAACGGCGGCCGCTGCAACCCTGGCACCGGCCAGTG
CGTCTGCCCCACGGGCTGGGTGGGCGAGCAATGCCAGCACTGCGGGGGCCGCTTCAGACTAACTGGCTCT
TCTGGATTTGTAACAGATGGACCTGGGAATTATAAATATAAGACGAAGTGCACATGGCTCATTGAAGGAC
AGCCAAATAGAATAATGAGACTTCGCTTCAACCATTTTGCTACAGAATGTAGCTGGGACCATTTATATGT
TTATGATGGGGACTCAATCTACGCACCTCTGATTGCTGCCTTTAGTGGCCTCATTGTTCCTGAAAGAGAT
GGCAATGAGACGGCTCCTGAGGTCACTGTCACTTCAGGTTATGCACTGCTGCATTTTTTCAGTGATGCTG
CTTATAATCTGACTGGATTTAATATCACTTACAATTTTGACATGTGTCCGAATAATTGCTCAGGCCGAGG
AGAGTGTAAGAGCAGTAACAGCAGCAGCGCTGTTGAGTGTGAATGTTCTGAAAACTGGAAAGGGGAGTCG
TGTGACATTCCTCACTGTACAGACAACTGTGGCTTTCCTCACCGAGGCATCTGTAATGCAAGCGATACCA
GAGGGTGCTCCTGCTTTCCTCACTGGCAGGGTCCTGGATGCTCAATTCCTGTGCCAGCTAACCAGTCTTT
TTGGACTCGAGAAGAATATTCTGATTTAAAGCTTCCCAGAGCCTCTCATAAAGCTGTGGTCAATGGAAAT
ATAATGTGGGTTGTTGGCGGATATATGTTCAACCATTCAGATTACAGCATGGTTTTAGCGTATGACCTGA
CTTCTAGGGAATGGCTTCCACTAAACCATTCTGTGAACAGTGTGGTTGTAAGATATGGTCATTCTTTGGC
ATTACATAAGGATAAAATCTACATGTATGGAGGAAAAATTGATTCAACAGGGAACGTGACCAATGAGCTG
AGAGTATTTCATATTCATAATGAATCATGGGTATTGTTAACTCCGAAAGCTAAGGATCAGTATGCAGTGG
TTGGACACTCAGCACACATTGTTACACTGGCATCTGGCCGTGTGGTCATGTTGGTCATCTTCGGTCATTG
CCCACTCTATGGATATATAAGCGTTGTGCAGGAATATGACTTGGAAAAGAACACATGGAGTATATTACAT
ACTCAGGGTGCTCTTGTGCAAGGGGGTTATGGCCACAGTAGTGTTTATGATGACAGGACCAAGGCTCTGT
ACGTTCATGGTGGCTACAAGGCTTTCAGCGCCAACAAATACCGGCTTGCAGATGACCTCTACAGATACGA
TGTGGATACTCAGATGTGGACCATTCTTAAGGACAGCCGATTTTTCCGTTACTTGCATACAGCTGTGATA
GTGAGTGGAACCATGCTGGTGTTTGGAGGGAACACACACAATGACACTTCCATGAGCCACGGTGCCAAAT
GCTTCTCCTCAGACTTCATGGCTTATGACATTGCTTGTGACCGATGGTCAGTGCTTCCCAGACCTGAGCT
CCATCATGATGTCAACAGATTTGGCCATTCAGCAGTCTTGTACAACAGCACCATGTATGTGTTCGGCGGC
TTCAACAGCCTCCTCCTCAGTGACGTCTTGGTCTTTACCTCGGAGCAGTGCGATGCACACCGCAGTGAAG
CTGCTTGTGTGGCAGCAGGACCTGGTATCCGGTGTCTGTGGGACACACAGTCGTCTCGATGTACCTCCTG
GGAGTTGGCAACTGAAGAACAAGCAGAAAAGTTAAAATCAGAGTGTTTTTCTAAAAGAACCCTTGACCAT
GACAGATGTGACCAGCACACAGATTGTTACAGCTGCACAGCCAATACCAATGACTGCCACTGGTGCAATG
ATCACTGTGTCCCTGTGAACCACAGCTGCACAGAAGGCCAGATCTCCATTGCCAAGTATGAGAGTTGCCC
CAAGGATAACCCCATGTACTACTGCAATAAGAAAACCAGCTGCAGGAGCTGTGCCCTAGACCAGAACTGC
CAGTGGGAGCCCCGGAATCAAGAGTGCATCGCCCTGCCGGAAAATATCTGTGGCAATGGCTGGCATTTGG
TTGGAAACTCGTGTCTGAAAATCACTACTGCTAAGGAGAATTATGACAATGCTAAATTGTCCTGTAGGAA
CCACAATGCCTTTTTGGCTTCCCTCACATCCCAGAAGAAGGTGGAGTTTGTCCTTAAGCAGCTTCGATTA
ATGCAATCATCTCAAAGTATGTCCAAGCTCACTCTGACTCCATGGGTTGGTCTTCGGAAGATCAATGTGT
CTTACTGGTGCTGGGAGGATATGTCTCCATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGAGCCCAG
TGATGCTGGCTTCTGTGGGATCTTGTCAGAGCCTAGTACTCGGGGATTAAAGGCTGCAACCTGCATCAAC
CCTCTCAATGGCAGCGTCTGTGAAAGGCCTGCAAACCACAGTGCCAAGCAGTGCCGGACACCATGTGCCC
TGCGGACAGCGTGTGGCGAGTGCACTAGCAGCAGCTCGGAGTGCATGTGGTGCAGTAACATGAAGCAGTG
TGTGGACTCCAATGCCTACGTGGCCTCCTTCCCTTTTGGCCAGTGTATGGAATGGTATACGATGAGCAGC
TGCCCACCTGAAAATTGCTCTGGCTACTGTACCTGCAGCCATTGCTTGGAGCAGCCAGGCTGTGGTTGGT
GTACTGATCCTAGCAATACTGGGAAAGGAAAATGTATTGAGGGCAGCTATAAAGGACCTGTGAAGATGCC
GTCACAGGCCTCTGCAGGAAATGTGTATCCACAGCCCCTTCTGAACTCCAGCATGTGTCTAGAGGACAGC
AGATACAACTGGTCTTTCATTCACTGTCCAGCTTGCCAGTGCAACGGACACAGCAAATGCATCAACCAGA
GTATCTGTGAGAAGTGTGAGGACCTGACCACGGGCAAGCACTGCGAGACCTGCATATCTGGCTTCTATGG
TGACCCGACTAATGGAGGCAAATGTCAGCCATGCAAGTGCAATGGGCACGCATCACTGTGCAACACCAAC
ACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCCAGCTATGTGAGGTAGAAAATC
GATACCAGGGAAACCCTCTCAAAGGAACATGCTACTATACCCTTCTCATTGACTATCAGTTCACCTTTAG
CCTGTCCCAGGAAGACGACCGCTACTACACAGCCATCAACTTTGTGGCTACTCCTGATGAACAAAACAGG
GATTTGGACATGTTCATCAATGCCTCCAAAAACTTCAACCTCAACATCACCTGGGCCACCAGCTTCCCAG
CCGGAACCCAGACTGGAGAAGAGGTGCCTGTTGTTTCAAAAACCAACATCAAGGAATACAAAGATAGCTT
CTCTAATGAGAAATTTGATTTTCGCAACCATCCAAACATCACTTTCTTTGTTTATGTCAGTAATTTCACT
TGGCCCATCAAAATTCAGATTGCCTTCTCCCAGCACAGCAACTTCATGGACCTGGTACAGTTCTTCGTGA
CTTTCTTCAGTTGTTTCCTCTCGCTGCTTCTGGTGGCTGCAGTGGTCTGGAAGATCAAGCAGAGCTGTTG
GGCATCCAGGCGGAGAGAGCAACTTCTTCGGGAGATGCAACAGATGGCCAGCCGCCCCTTTGCTTCTGTA
AACGTTGCCTTGGAAACAGATGAAGAACCTCCTGATCTCATTGGGGGAAGTATAAAGACCGTTCCTAAGC
CCATTGCCCTGGAGCCCTGCTTTGGTAACAAAGCCGCAGTCCTCTCTGTATTCGTGAGGCTCCCTCGAGG
ACTGGGAGGAATCCCTCCTCCTGGTCAGTCAGGTCTCGCTGTGGCCAGTGCCCTGGTGGACATTTCTCAG
CAGATGCCAATAGTGTACAAGGAGAAGTCAGGAGCTGTAAGAAACCGGAAGCAGCAGCCGCCTGCACAGC
CTGGAACCTGCATTTGA

Translation (1428 aa):
MVAVAAAAATEARLRGSTTATAAPAGRKGRQHRPCTATGAWRPGPRARLCLPRVLSRALPPPPLLPLLFS
LLLLPLPREAEAAAVAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVCPTGWVGEQCQHCGGRFRLTGS
SGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLIAAFSGLIVPERD
GNETAPEVTVTSGYALLHFFSDAAYNLTGFNITYNFDMCPNNCSGRGECKSSNSSSAVECECSENWKGES
CDIPHCTDNCGFPHRGICNASDTRGCSCFPHWQGPGCSIPVPANQSFWTREEYSDLKLPRASHKAVVNGN
IMWVVGGYMFNHSDYSMVLAYDLTSREWLPLNHSVNSVVVRYGHSLALHKDKIYMYGGKIDSTGNVTNEL
RVFHIHNESWVLLTPKAKDQYAVVGHSAHIVTLASGRVVMLVIFGHCPLYGYISVVQEYDLEKNTWSILH
TQGALVQGGYGHSSVYDDRTKALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTILKDSRFFRYLHTAVI
VSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPELHHDVNRFGHSAVLYNSTMYVFGG
FNSLLLSDVLVFTSEQCDAHRSEAACVAAGPGIRCLWDTQSSRCTSWELATEEQAEKLKSECFSKRTLDH
DRCDQHTDCYSCTANTNDCHWCNDHCVPVNHSCTEGQISIAKYESCPKDNPMYYCNKKTSCRSCALDQNC
QWEPRNQECIALPENICGNGWHLVGNSCLKITTAKENYDNAKLSCRNHNAFLASLTSQKKVEFVLKQLRL
MQSSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPSTRGLKAATCIN
PLNGSVCERPANHSAKQCRTPCALRTACGECTSSSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMSS
CPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQASAGNVYPQPLLNSSMCLEDS
RYNWSFIHCPACQCNGHSKCINQSICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTN
TGKCFCTTKGVKGDECQLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNR
DLDMFINASKNFNLNITWATSFPAGTQTGEEVPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNFT
WPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLLREMQQMASRPFASV
NVALETDEEPPDLIGGSIKTVPKPIALEPCFGNKAAVLSVFVRLPRGLGGIPPPGQSGLAVASALVDISQ
QMPIVYKEKSGAVRNRKQQPPAQPGTCI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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