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Report for CCDS87763.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87763.1 Public Homo sapiens X FAM236C 24 110 108 CCDS HistoryNCBI Gene:109729126Re-query CCDS DB by CCDS ID:87763.1Re-query CCDS DB by GeneID:109729126See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 87763.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636267.1 ENSP00000490543.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000636267.1Link to Ensembl Protein Viewer:ENSP00000490543.1Re-query CCDS DB by Nucleotide ID:ENST00000636267Re-query CCDS DB by Protein ID:ENSP00000490543
Original member Current member NCBI NM_001351111.1 NP_001338040.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001351111.1Link to Protein Sequence:NP_001338040.1Re-query CCDS DB by Nucleotide ID:NM_001351111Re-query CCDS DB by Protein ID:NP_001338040Link to BLAST:NP_001338040.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338040.1 79 P0DP71 79 100% 0 0

Chromosomal Locations for CCDS 87763.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 72912715 72912750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72912920 72913095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72913251 72913278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (240 nt):
ATGATCTTCACTCCCTTCCTTCCACCTGCTGACCTGTCTGTCTTTCAGAATGTGAAAGGGCCGCAAAAAG
ACCCTGAGGAATTGGTTGCTGTATCTGACACCGCGGAGGACCCATCCAGTGGCACAGGCTTGCCCAGGGA
ACCTGCTCTTCTGCGAGGGTCTTGGAGGAGCCGGTTCCAGAGGGCCCTGGCATGTTTCATCAAGTGCTTC
AGGGGAGGATACCGGGCACTCGGAATCTGA

Translation (79 aa):
MIFTPFLPPADLSVFQNVKGPQKDPEELVAVSDTAEDPSSGTGLPREPALLRGSWRSRFQRALACFIKCF
RGGYRALGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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