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Report for CCDS44387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44387.1 Public Homo sapiens 10 C10orf71 24 110 108 CCDS HistoryNCBI Gene:118461Re-query CCDS DB by CCDS ID:44387.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44387.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374144.8 ENSP00000363259.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374144.8Link to Ensembl Protein Viewer:ENSP00000363259.3Re-query CCDS DB by Nucleotide ID:ENST00000374144Re-query CCDS DB by Protein ID:ENSP00000363259
Original member Current member NCBI NM_001135196.2 NP_001128668.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135196.2Link to Protein Sequence:NP_001128668.1Re-query CCDS DB by Nucleotide ID:NM_001135196Re-query CCDS DB by Protein ID:NP_001128668Link to BLAST:NP_001128668.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128668.1 1435 Q711Q0-1 1435 100% 0 0

Chromosomal Locations for CCDS 44387.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 49322546 49326853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4308 nt):
ATGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGACTCCTCCAGCATCGGCAGCGTGTTGGATG
ATGCAGACAGGGAGGTGAGCAGCCTAACAGACCGGGCATTCCGGAGTTTGTGCATCTCCGAGGACACATC
CTTCCATGACTCCTATCTGGCTGTGTCCCCGGATATCACCCGACAGGTGTTTGGGACTTTTCACCAGAGA
ACAGTGGGCCACACCCAGAGGAAAAGTGGCATTTGGAGCCAGTTACCGTCACAGGGCACGGAACATTCGG
GCTGGGCGGCCACCTTCCAACAGCTACCCAAGTACGTTCAGGGAGAGGAAAAGTACCCCAAAACCAGCCC
CCCACCAACGCCAGTCCAGAGGAGACTGGAGGTGCCAGTTTCCGGCCTAAGGAGCAGCAATAAGCCTGTC
TCCAAAGTATCAACACTAATTAAATCTTTCGACAGGACCGAGAGCCAACGTTGTGAGAGCAGGCCCACTG
CCAGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCGCTCCTCTTCCAGAAAACAGTGTCAACTTCTG
CTTCGATTCTGCCTTTCTGACAGTCAGGAGGGTGCCCGCTGAAGTTTCCAACACCCATCAGAACAGCTAC
CAGCCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCA
GCTTCCTCCCAGCAGCCAATGACACGGCCACCTTATGTGAGTCAAAGTTCCCCTCTCCACACCACAAGCC
AGTCACGGGTGAGCCTGGGAGAGGCAAAGGTACCTTTCTGCACAGTGAAAATAGTGCTTTTGAGTCATGG
AATGCCCACCAACCAAAGCTGCTGGAGAGAAAGGACACAGCTGGAACCGTCCCAGAAAGCAAAGCTCCCA
AGCACTATGGGGACACGACCTTGCTAAGAGAACCCTGTCCTCCTGAGCGCACAGTCTCTCCCTGCCAGGT
CCAGGCCAGCTGCAGTCAGGAAGAGAACAGACTTGCAGCAGGGGCTCTGTCCACATCTATACCCTGGGGG
TGCAGGGATCCAGGAGCCCAGGTATTTGCTGTGGAAGGAAAAGCTCCCAGCTCACAACCTGATTCTCAAG
AGAAGCCAGCCCAGCCCCCATGGAGGAAGCCAAAGACTGGCAAAAAAGGGAAAGAAAGTCTACAAGATAC
TTTAGAAGAAAAGACACAGACCAACCAGAGAGGCCCACCTTTGTATACAAAACACAACCCCCAGGAACAG
TTTTCAGAAAACAATGCTCTTGACCTGCCTGTGGAACCCAATGAACATTATGATCCCCCCTTTAACATCA
GTAAGCTCCTGACCCCCATCATACCCAGCAAGCACGCCCTGGATTCAGCAGACAGCCAGCCAGCAGAGCG
AACCCCATCACCCCCAGGACAGCTAAACGGATACCAAGAGAAGGAGCCCAGTGAATGTCAGTCTCGAGAC
AGCTACAAGTCCAAAGCCCCTAGCCTGCTGTTCAACCTCAAGGACGTGCGGAAGCGTGTTAAGAGCACAT
ACAGTTCCTCACCTCTCTTGAAAGTGCTTGATGAGAAAACTAGAGGTAAGGTTGATGGAAAGCAAGAACC
TGTGAGCAACGGTGTCATCCTCCCCAATGGGCTTGAGGAAAGCCCTCCAAATGAGCTTTCTAAGGAGAGA
CCCGCTGATGACCCCACTGCATCACACATCAATCCCCAGAAGGACCCTACAGCTGACCCCAGTGAGCCCT
CTGCAGACAGCTATCTAACTCTTAGCACAGCTCCGACTATCGCCAAAGCCCCCTTCTATGTCAATGGGGA
GGCTGCTGAGAGAAGCAGTTATGAGAACAAGGAGGTGGAAGGAGAGTTGGAGATGGGTCCTGCCGGATCC
AGCTGGTGTCCAGACTCCAGGGAACACCGCCCCAGGAAACACCTCTCCCTGAGGCTTTGCAATAGGGATC
CTGAGCCTGGAGGGGCTACAGAGAAAATGAAGACCCACCAGCTAGAGAATGGGCTCTCCAGATCTGTGTC
CCAAGAGACAGAACCTGAGAGGGAAGCAGGACTTCAGAACACACATTTGAACCAGAAATTCTTCCCAGGG
CCCCTCTCTCCTGAGGAGGAAGATGTGTTTTACAGTGACAGCCAATCCGATTTTATGCCAAGCCTCAAAG
GTAAGGCCAAATTCAGCACCAGCTCTTCAGATCAATCCTTTGCCTCATTTGATGATCAGCAGAAGATGTG
GTTTACTGAGAACCAGCGGGAAGACAGGAGGAAGGATGTGAGTGCAGGTGACAGTCAGAAGGATGAGAAG
GAGAATGTGATGCGGAAGGATGAGCTGCAGTACTGTGCCTTAAGCAATGGGCACGCATGCCTGGAAAACC
GCAGCCAGGGGGAAGCATTGCAAAGAGAAAGGGAAAGTGTGTCTGGAGGAAGAACCAGGAAGGCATCAGC
AGAGGAAGCTAATTTCAGAGGCTCTTGGATTGGGGAAAATAAGGGCACAACCTTTTCACAGGCCAAAGAC
CTTACTCCCTCACCATCTTCTGCTTCAAACAGGCACATGCTGTTTACGATTAAAGACAACACCCTCAGAG
CTACCCCCGTAATTAAACCTATCATGCTGCCTCTCCTGAGGACCATGTCCTTGGAGGACTCCCTCAGCAG
TGGCCACAAAGAGGAGGAATTGCCAAGGCCAGAATGGGGTGAGGATCCTGGGTTTTGTGCCCCCGAAAAC
CAGGACATTCTTGGTACATCGACACCCACTAACACACGGGGCACACGTGTGAAGTGCATGGCCAACGAGG
TCATGGAGGACCCTGGGCAGGGGTCGAGCATGGCCAGGATGGAGGCCTCTCAGCCAGCCCCAAAGGGGAA
TTTCCCATCTATGCCTCTGGTGGGAGAGGGGGACCGGGTGAAGGCACCACCAGATGCTGCACCTGGCCTC
GTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCCCCATGGCACATCCCCACCA
TTGCTTTACCCGAGGGTGACATAGAAGACCAGCCACCCCCATGGCAGCCCGAAAACTGTTGGGAAGAGCA
AACACCAGGTTTCAAGAGTCACTTTTTGTCCACACCCAGAGCAGGGCCCCCTGGCAGAAGACTGGTCCCC
AGTGAGAGGGCGAATTCCCCCAACCCCGGCTCCCCCGGGGAGAGCAGTGCCTGCTCCCCTGCTGCCAGCA
ACATTTGGGAGGAGTCTTCCCAGGCCCCTGGAGGACCAGAGCTGCTTCCCGAGGAGCCTAATCAAGCCAG
CCCCTGGGCCAGCTCCAGTCCTGCCAGGGTCACCCGGAGGGAGGACCTGACCCACGCCCTCGTGTGGGAG
GGCGGCTCTGACCCCCTACTTGAGCTGTCGGCAGAAGACCTCCGGACCCTCTCTCCAAGAGGTTCATTGC
TGGATGTGGCCACCAGCCCAGCAGGCACCTCTGGGAGACTTGAGCTTCCTGCACAGCTAGAGAGGACAGC
AAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAG
AGGAGGAAGACGGATCAGGCTCAGGAGAAGCATGGCGAGTCACAGGAGGGAAAGCCCTGCCCGGAGGACT
TGGAGCAGACACAGCAAAGGCCGCTGTGCCCCAGAGAGAGGCCCCGACACAATTTCCCCGTGGTCCGTTC
CCTGCCCCCTCCCGTGCACCGCCACTCCGTGTCCGGCTTCTCGGAGCCTGTCGGGAGGCGGCCCGGGGGC
CCCCAGTCCCTCACACCCCTGCCCGCGTACCCCGCCACCCAGAAGGTCCTCCAGGATCCGCAGTCCGGGG
AGTACTTTGTCTTCGACTTGCCACTCCAGGTGAAAATCAAGACCTTCTATGACCCAGAGACGGGCAAGTA
TGTCAAGGTCTCCATCCCGTCCTCCGAGGGGGCCTCCCCAGAGCCGCCCCCACCGGACGCCCTGGCCGCT
CCCTATGTGCTGTACCCCGGCTTCCAGCCAGTGCCCGTGACGGCCTTGATGCCGCTGCGCTGCTCCTCTC
AGCTCTCCGCGCCCACCTTCCTCAGGCAGGGCCCTCGTGCCTCCGCGGCCCGCGCCAGGACCCAGAGTGT
CCACGAGTCTGGACTACAGCTGGACCCAGGGCCTCACGGTGACTGCACCCCGCACTCTGCAGGCCAGCGC
CCTCATGGTCCTCCCCAGAGCCCAGGAGAGGAGGGTGTAGAAGCTCCAGGCCTGGGCATCATCTCCACTG
ATGACCTAGAGGACTTTGCCACAGAAGGCATTTCTTGA

Translation (1435 aa):
MMQGNKKCTDAFSDSSSIGSVLDDADREVSSLTDRAFRSLCISEDTSFHDSYLAVSPDITRQVFGTFHQR
TVGHTQRKSGIWSQLPSQGTEHSGWAATFQQLPKYVQGEEKYPKTSPPPTPVQRRLEVPVSGLRSSNKPV
SKVSTLIKSFDRTESQRCESRPTASKPPALKNPPKFAPLPENSVNFCFDSAFLTVRRVPAEVSNTHQNSY
QPGRKHGEQESSKNPEMACHGSSSFLPAANDTATLCESKFPSPHHKPVTGEPGRGKGTFLHSENSAFESW
NAHQPKLLERKDTAGTVPESKAPKHYGDTTLLREPCPPERTVSPCQVQASCSQEENRLAAGALSTSIPWG
CRDPGAQVFAVEGKAPSSQPDSQEKPAQPPWRKPKTGKKGKESLQDTLEEKTQTNQRGPPLYTKHNPQEQ
FSENNALDLPVEPNEHYDPPFNISKLLTPIIPSKHALDSADSQPAERTPSPPGQLNGYQEKEPSECQSRD
SYKSKAPSLLFNLKDVRKRVKSTYSSSPLLKVLDEKTRGKVDGKQEPVSNGVILPNGLEESPPNELSKER
PADDPTASHINPQKDPTADPSEPSADSYLTLSTAPTIAKAPFYVNGEAAERSSYENKEVEGELEMGPAGS
SWCPDSREHRPRKHLSLRLCNRDPEPGGATEKMKTHQLENGLSRSVSQETEPEREAGLQNTHLNQKFFPG
PLSPEEEDVFYSDSQSDFMPSLKGKAKFSTSSSDQSFASFDDQQKMWFTENQREDRRKDVSAGDSQKDEK
ENVMRKDELQYCALSNGHACLENRSQGEALQRERESVSGGRTRKASAEEANFRGSWIGENKGTTFSQAKD
LTPSPSSASNRHMLFTIKDNTLRATPVIKPIMLPLLRTMSLEDSLSSGHKEEELPRPEWGEDPGFCAPEN
QDILGTSTPTNTRGTRVKCMANEVMEDPGQGSSMARMEASQPAPKGNFPSMPLVGEGDRVKAPPDAAPGL
VASNCKSGSADSGKLAAPWHIPTIALPEGDIEDQPPPWQPENCWEEQTPGFKSHFLSTPRAGPPGRRLVP
SERANSPNPGSPGESSACSPAASNIWEESSQAPGGPELLPEEPNQASPWASSSPARVTRREDLTHALVWE
GGSDPLLELSAEDLRTLSPRGSLLDVATSPAGTSGRLELPAQLERTASKPPAVPPKTEKALRRAKKLASK
RRKTDQAQEKHGESQEGKPCPEDLEQTQQRPLCPRERPRHNFPVVRSLPPPVHRHSVSGFSEPVGRRPGG
PQSLTPLPAYPATQKVLQDPQSGEYFVFDLPLQVKIKTFYDPETGKYVKVSIPSSEGASPEPPPPDALAA
PYVLYPGFQPVPVTALMPLRCSSQLSAPTFLRQGPRASAARARTQSVHESGLQLDPGPHGDCTPHSAGQR
PHGPPQSPGEEGVEAPGLGIISTDDLEDFATEGIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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