NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36088.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36088.1 Public Mus musculus 10 Baz2a 23 108 98 CCDS HistoryNCBI Gene:116848Re-query CCDS DB by CCDS ID:36088.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36088.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045621.8 ENSMUSP00000044359.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045621.8Link to Ensembl Protein Viewer:ENSMUSP00000044359.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000045621Re-query CCDS DB by Protein ID:ENSMUSP00000044359
Original member Current member EBI ENSMUST00000220049.1 ENSMUSP00000151961.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000220049.1Link to Ensembl Protein Viewer:ENSMUSP00000151961.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000220049Re-query CCDS DB by Protein ID:ENSMUSP00000151961
Original member Current member NCBI NM_054078.2 NP_473419.2 Accepted alive Link to Nucleotide Sequence:NM_054078.2Link to Protein Sequence:NP_473419.2Re-query CCDS DB by Nucleotide ID:NM_054078Re-query CCDS DB by Protein ID:NP_473419Link to BLAST:NP_473419.2

Chromosomal Locations for CCDS 36088.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128108896 128109031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128110755 128111348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128112582 128112767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128113463 128113681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128114334 128114783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128115025 128115085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128116061 128116169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128116306 128116407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128116547 128116757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128118555 128118655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128118955 128119020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128119270 128119500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128119624 128119878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128121111 128121325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128121591 128121665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128121800 128121980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128122068 128122127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128122306 128122450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128123024 128123655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128123766 128123988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128124107 128124262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128124335 128124486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128124893 128125182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128125269 128125401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128125499 128125645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128126018 128126241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128126326 128126469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128126588 128126753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5664 nt):
ATGGAGGCAAACGACCATTTTAACTTTACTGGCCTTCCTCCTGCACCAGCTGCCTCAGGACTGAAACCCT
CTCCTTCCTCGGGGGAGGGCCTCTACACTAACGGGTCTCCCATGAACTTCCCCCAGCAAGGGAAAAGTTT
GAATGGGGATGTGAATGTTAATGGCTTATCTACTGTATCTCACACTACTACTTCAGGGATTTTGAACTCT
GCTCCCCACTCCTCTAGCACCTCACACCTCCATCACCCTAACGTGGCCTACGACTGTCTTTGGAACTACT
CACAGTACCCATCTGCCAATCCTGGCAACAACCTCAAGGACCCACCCCTTCTTTCTCAGTTCCCTGGGGG
ACAATACCCGCTCAACGGTATCCTTGGGGGCAACCGACAACCTTCATCCCCAAGTCACAACACTAATCTT
CGAGCTGGGAGCCAAGAGTTCTGGGCCAATGGTACCCAGAGTCCCATGGGGCTTAACTTCGATTCACAGG
AACTGTATGATTCTTTTCCTGATCAGAATTTTGAGGTGATGCCCAATGGACCCCCAAGTTTTTTCACCTC
CCCTCAGACTTCTCCAATGTTGGGGTCTAGTATCCAGACCTTTGCACCTTCCCAGGATGTAAGCAGTGAC
ATCCATCCTGATGAAGCAGCAGAAAAGGAGCTGACTTCAGTTGTGGCAGAAAATGGCACTGGCTTGGTAG
GCAGCCTGGAGCTGGAGGAAGAGCAGCCAGAACTAAAGATGTGTGGCTACAATGGTTCTGTCTCCTCTGT
GGAGTCTTTACACCAAGAAGTCTCCGTCCTGGTCCCTGATCCCACAGTGAGCTGTCTAGATGATCCTTCA
CATCTTCCTGATCAACTGGAAGACACTCCAATTCTCAGTGAAGACTCCCTGGAGCCCTTTGACTCTCTGG
CAGCAGAGCCAGTGAGTGGCAGTCTTTATGGTATAGATGATGCGGAGCTGATGGGTGCAGAAGACAAGTT
GCCTCTGGAGGGCAACCCTGTGATCTCTGCCCTCGATTGCCCTGCTCTCAGTAATGCTAATGCCTTCAGT
CTCCTGGCAGACGACAGCCAGACATCAGCCTCCATCTTTGTCAGCCCTACCTCCCCACCTGTCTTAGGGG
AGTCTGTCTTGCAAGATAACAGCTTTGGACTGAACAGTTGCAGTGACTCTGAACAGGAAGAAATAGAGAC
CCAGTCTTCAAACTTCCAACGTCCCCTGACTGAGCCAGCTCCTGACCAGCCACCTAGTACTCAACTACAT
CCAGCAGTTTCACCAACAGCCTCCCCAGCAGCCTCCTTGACAGCATCTGCAGAAATCTCTCCAGCTGTCT
CTCCAGTAGCATCCTCGCCTGTCCCTCCTGAAGTCTTTGTAGCAGTCTCTCCAGCTTCCTCACCTGCTCT
GCCAGCCATCTCTTTGGAAGCCTCTATGACAACTCCAGTAACTTCTCCTCAAGGTTCCCCTGAACCTTCT
CCAGCAGCTGCCTTCCAGACTGTCTCCCCAGCAAGGAAAAATGTCAGCAGTGCTCCTAAAGCGCGTGCTG
ATCGAGAAGAGACGACTGGAGGAGCAGTTGCAGTCTCTGGTAGTGGTGATGTACTGAAGAGACGTATTGC
TACCCCAGAAGAAGTTCGTCTTCCCCTCCAGCATGGGTGGCGAAGAGAAGTGCGCATCAAGAAGGGCAGC
CATCGGTGGCAGGGGGAGACTTGGTACTATGGCCCCTGTGGGAAGAGAATGAAGCAATTTCCAGAAGTTA
TCAAGTACCTGAGCCGAAATGTGGTGCACAGTGTCCGCCGTGAGCACTTCAGCTTCAGTCCCCGCATGCC
TGTTGGAGATTTCTTTGAAGAAAGAGATACACCAGAGGGCTTGCAGTGGGTCCAGTTATCAGCAGAGGAG
ATTCCTTCCAGAATTCAAGCAATCACTGGCAAACGAGGCCGACCTCGAAACAATGAGAAGGCTAAGAACA
AGGAAGTTCCCAAAGTGAAGCGGGGCCGAGGTCGGCCTCCTAAGATCAAAATGCCTGAGCTGTTGAATAA
AACAGATAACCGACTTCCAAAGAAACTGGAAACCCAAGAAATACTGAGTGAGGACGATAAAGCAAAGATG
ACTAAAAACAAAAAGAAGATGAGGCAGAAGGTCCAACGGGGAGAAAGTCAGACTCCTGTCCAAGGGCAGG
CCAGAAACAAGAGGAAGCAAGACACCAAGAGCTTGAAGCAGAAGGACACTAAGAAGAAATTGAAGGCTGA
GAAAGAGAAGATGAAGACAAAGCAGGAAAAGCTGAAGGAAAAGGTAAAGCGAGAAAAGAAAGAAAAGGTA
AAAGCGAAGGGGAAGGAAGGGCCCAGAGCCAGGCCATCCTGTAGAGCAGACAAGACCCTTGCCACACAGA
AGCGGCTAGAGGAGCAGCAGAGGCAGCAGGCTATCCTGGAGGAGATGAAGAAGCCCACAGAGGATATGTG
TCTGTCTGACCACCAGCCCCTGCCTGACTTCACACGCATCCCTGGTTTGACACTGTCCAGTAGGGCTTTC
TCAGATTGCTTGACCATCGTGGAGTTCCTTCACAGTTTTGGCAAAGTGCTAGGCTTTGACCTTACCAAAG
ATGTTCCTAGTCTAGGAGTCCTGCAGGAGGGACTCTTATGTCAAGGTGACAGCTTGGACAAAGTGCAGGA
CCTGCTGGTGCGACTGCTGAAGGCTGCACTCCATGATCCTGGTCTGCCCCCCTACTGTCAGTCCCTGAAG
ATATTGGGGGAGAAGATGTCAGAGATCCCATTGACCAGAGATAATGTGTCTGAGATACTGCGCTGCTTCC
TCATGGCATATAGAGTGGAGCCATCCTTCTGTGACAGTCTGCGTACCCAGCCTTTTCAGGCCCAGCCACC
TCAACAGAAGGCTGCTATTCTAGCCTTCCTTGTGCATGAGCTTAACAGCTCCACCATTATCATCAATGAG
ATTGACAAGACTCTGGAAAGTGTGTCTAGCTGCAGGAAGAACAAGTGGATTGTTGAAGGCCGACTCCGGA
GACTGAAAACTGCTCTGGCCAAGCGAACTGGGCGGCCTGAGGTTATGATGGAAGGGGCAGAAGACGGCCT
AGGACGGAGGCGCAGTTCTCGGATCATGGAGGAAACCAGTGGCATAGAAGAGGAGGAAGAGGAAGAAAAT
ACAACAGCTGTCCATGGCCGCAGGGGTCGAAAAGAAGGAGAGATTGATGTTGCAGCATCTAGCATTCCAG
AGCTAGAGCGCCATATAGAAAAACTCAGTAAGCGTCAGCTCTTCTTTAGAAAAAAGCTGCTTCACTCATC
CCAGATGCTTCGGGCAGTGTCCTTGGGTCAAGACCGCTATAGACGCCATTACTGGGTATTACCGTATCTT
GCTGGTATCTTTGTGGAAGGATCGGAAGGGAGCACAGTTACTGAAGATGAAATAAAGCAAGAAACTGAGT
CCTTGATGGAAGTAGTCACTTCAACACCCAGCTCTGCCCGAGCCTCTGTAAAGAGAGAATTAACTGGCTC
CAATGCCTCTACTTCTCCTGCCCGGTCCCGAGGCCGACCTCGAAAACCTAAGCCTGGGTCTCTGCAGCCT
CAGCACCTTCAGTCCACCATTAGGGAATGTGATTCAGAGCAAGCCCAGACTCAAGTTCACCCAGAACCCC
AGCCTCAGCTTCAGGCCCCTACCCAGCCCCATCTTCAGCCAAGTAGTGGGTTCCTAGAGCCAGAAGGTTC
CCCTTTCTCTCTGGGTCAGAGCCAGCATGACCTCAGCCAGTCTGCCTTCTTGTCTTGGCTGAGCCAGACT
CAGAGCCACAACTCCCTGTTGAGCAGCTCAGTCCTCACGCCGGACAGCAGCCCAGGGAAACTAGACTCTG
CTCCGTCTCAGTCCTTGGAGGAGCCCGAGCCTGATGAGGCTCAGTCCTGCCCTGGTCCTCAAGGTCCCTG
GTTTAACTTCTCAGCCCAGATACCCTGTGATGCTGCTCCTACACCACCTCCTGCAGTCTCTGAGGACCAA
CCTACTCCCTCCCTCCAGCTGCTGGCCTCCTCTAAACCAATGAATACACCCGGTGCTGCCAATCCTTGTT
CCCCAGTGCAGCTCTCTTCCACTCACTTGCCTGGAGGGACCCCTAAGAGGCTATCAGGGGACTCTGAAGA
AATGTCACAGAGTCCCACTGGGCTGGGGCAACCAAAGCGGAGGGGGAGACCCCCTAGCAAGTTCTTCAAG
CAGGTGGAGCAGCATTACTTAACCCAGCTGACAGCCCAGCCTATCCCCCCTGAGATGTGCTCGGGCTGGT
GGTGGATCCGAGACCCTGAGACACTGGATGTCCTGCTCAAGGCACTGCATCCCCGAGGCATCCGGGAGAA
GGCGCTTCACAAACATCTTAGCAAGCACAAGGACTTTTTGCAGGAAGTTTGTTTACAGCCCTTAACTGAT
CCCATCTTTGAGCCTAATGAGCTCCCTGCCTTGGAAGAAGGCGTTATGAGCTGGTCCCCCAAAGAGAAGA
CGTACGAGACAGACCTAGCTGTGCTCCAGTGGGTGGAGGAGCTGGAGCAGCGGGTTGTCCTCTCCGATCT
GCAGATTCGGGGCTGGACATGCCCTACCCCAGACTCCACCAGAGAAGACTTGACCTACTGTGAGCATCTG
CCTGACTCCCCGGAGGATATCCCTTGGAGGGGTCGGGGCAGGGAAGGAACAGTACCTCAGCGGCAGAACA
ACAACCCTCTGGACCTCGCTGTGATGCGATTGGCTGTTCTGGAGCAAAATGTGGAGCGGCGGTACTTGCG
GGAGCCCCTCTGGGCAGCCCATGAGGTGGTAGTGGAGAAGGCCCTACTGAGCACACCCAATGGTGCCCCT
GATGGCACCTCAACTGAGATATCCTATGAGATCACCCCTCGTGTCCGAGTTTGGCGGCAGACACTTGAAA
GGTGCCGTAGTGCAGCCCAAGTGTGCTTGTGCATGGGCCAGCTAGAAAGGTCCATCGCGTGGGAGAAGTC
TGTCAACAAAGTGACCTGCCTGGTCTGCCGGAAGGGCGATAATGATGAGTTTCTCCTGCTGTGTGATGGG
TGTGACCGAGGCTGCCACATTTACTGTCATCGGCCCAAGATGGAGGCTGTTCCAGAAGGAGATTGGTTCT
GTGCTGTCTGTCTGTCCCAGCAGGTAGAGGAAGAGTACACTCAGAGGCCTGGTTTTCCAAAACGAGGTCA
GAAGCGGAAAAGTAGTTTTCCACTGACCTTCCCAGAAGGTGACAGCCGGCGGCGGATGTTGTCAAGGAGC
CGAGATAGTCCAGCAGTGCCTCGGTACCCAGAAGACGGGCTGTCTCCCCCCAAAAGACGGCGACATTCGA
TGAGAAGTCACCACAGTGATCTCACATTTTGCGAGATTATCCTGATGGAGATGGAGTCCCATGATGCAGC
CTGGCCTTTCCTAGAGCCTGTGAACCCTCGCTTGGTGAGTGGATACCGACGTGTCATCAAGAACCCTATG
GATTTTTCCACCATGCGAGAACGCCTGCTCCGTGGAGGGTACACTAGCTCAGAAGAGTTTGCAGCTGATG
CTCTGCTGGTTTTTGACAACTGCCAGACCTTCAATGAGGATGACTCTGAAGTGGGCAAGGCTGGGCACGT
CATGCGACGCTTCTTTGAGAGCCGCTGGGAGGAATTTTATCAGGGAAAACAGGCCAATCTGTGA

Translation (1887 aa):
MEANDHFNFTGLPPAPAASGLKPSPSSGEGLYTNGSPMNFPQQGKSLNGDVNVNGLSTVSHTTTSGILNS
APHSSSTSHLHHPNVAYDCLWNYSQYPSANPGNNLKDPPLLSQFPGGQYPLNGILGGNRQPSSPSHNTNL
RAGSQEFWANGTQSPMGLNFDSQELYDSFPDQNFEVMPNGPPSFFTSPQTSPMLGSSIQTFAPSQDVSSD
IHPDEAAEKELTSVVAENGTGLVGSLELEEEQPELKMCGYNGSVSSVESLHQEVSVLVPDPTVSCLDDPS
HLPDQLEDTPILSEDSLEPFDSLAAEPVSGSLYGIDDAELMGAEDKLPLEGNPVISALDCPALSNANAFS
LLADDSQTSASIFVSPTSPPVLGESVLQDNSFGLNSCSDSEQEEIETQSSNFQRPLTEPAPDQPPSTQLH
PAVSPTASPAASLTASAEISPAVSPVASSPVPPEVFVAVSPASSPALPAISLEASMTTPVTSPQGSPEPS
PAAAFQTVSPARKNVSSAPKARADREETTGGAVAVSGSGDVLKRRIATPEEVRLPLQHGWRREVRIKKGS
HRWQGETWYYGPCGKRMKQFPEVIKYLSRNVVHSVRREHFSFSPRMPVGDFFEERDTPEGLQWVQLSAEE
IPSRIQAITGKRGRPRNNEKAKNKEVPKVKRGRGRPPKIKMPELLNKTDNRLPKKLETQEILSEDDKAKM
TKNKKKMRQKVQRGESQTPVQGQARNKRKQDTKSLKQKDTKKKLKAEKEKMKTKQEKLKEKVKREKKEKV
KAKGKEGPRARPSCRADKTLATQKRLEEQQRQQAILEEMKKPTEDMCLSDHQPLPDFTRIPGLTLSSRAF
SDCLTIVEFLHSFGKVLGFDLTKDVPSLGVLQEGLLCQGDSLDKVQDLLVRLLKAALHDPGLPPYCQSLK
ILGEKMSEIPLTRDNVSEILRCFLMAYRVEPSFCDSLRTQPFQAQPPQQKAAILAFLVHELNSSTIIINE
IDKTLESVSSCRKNKWIVEGRLRRLKTALAKRTGRPEVMMEGAEDGLGRRRSSRIMEETSGIEEEEEEEN
TTAVHGRRGRKEGEIDVAASSIPELERHIEKLSKRQLFFRKKLLHSSQMLRAVSLGQDRYRRHYWVLPYL
AGIFVEGSEGSTVTEDEIKQETESLMEVVTSTPSSARASVKRELTGSNASTSPARSRGRPRKPKPGSLQP
QHLQSTIRECDSEQAQTQVHPEPQPQLQAPTQPHLQPSSGFLEPEGSPFSLGQSQHDLSQSAFLSWLSQT
QSHNSLLSSSVLTPDSSPGKLDSAPSQSLEEPEPDEAQSCPGPQGPWFNFSAQIPCDAAPTPPPAVSEDQ
PTPSLQLLASSKPMNTPGAANPCSPVQLSSTHLPGGTPKRLSGDSEEMSQSPTGLGQPKRRGRPPSKFFK
QVEQHYLTQLTAQPIPPEMCSGWWWIRDPETLDVLLKALHPRGIREKALHKHLSKHKDFLQEVCLQPLTD
PIFEPNELPALEEGVMSWSPKEKTYETDLAVLQWVEELEQRVVLSDLQIRGWTCPTPDSTREDLTYCEHL
PDSPEDIPWRGRGREGTVPQRQNNNPLDLAVMRLAVLEQNVERRYLREPLWAAHEVVVEKALLSTPNGAP
DGTSTEISYEITPRVRVWRQTLERCRSAAQVCLCMGQLERSIAWEKSVNKVTCLVCRKGDNDEFLLLCDG
CDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQVEEEYTQRPGFPKRGQKRKSSFPLTFPEGDSRRRMLSRS
RDSPAVPRYPEDGLSPPKRRRHSMRSHHSDLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRVIKNPM
DFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNEDDSEVGKAGHVMRRFFESRWEEFYQGKQANL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH