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Report for CCDS7430.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7430.1 Public Homo sapiens 10 FRA10AC1 24 110 108 CCDS HistoryNCBI Gene:118924Re-query CCDS DB by CCDS ID:7430.1Re-query CCDS DB by GeneID:118924See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7430.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359204.5 ENSP00000360488.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359204.5Link to Ensembl Protein Viewer:ENSP00000360488.3Re-query CCDS DB by Nucleotide ID:ENST00000359204Re-query CCDS DB by Protein ID:ENSP00000360488
Original member Current member NCBI NM_001347712.2 NP_001334641.1 Accepted alive Link to Nucleotide Sequence:NM_001347712.2Link to Protein Sequence:NP_001334641.1Re-query CCDS DB by Nucleotide ID:NM_001347712Re-query CCDS DB by Protein ID:NP_001334641Link to BLAST:NP_001334641.1
Original member Current member NCBI NM_001347713.2 NP_001334642.1 Accepted alive Link to Nucleotide Sequence:NM_001347713.2Link to Protein Sequence:NP_001334642.1Re-query CCDS DB by Nucleotide ID:NM_001347713Re-query CCDS DB by Protein ID:NP_001334642Link to BLAST:NP_001334642.1
Original member Current member NCBI NM_001347714.2 NP_001334643.1 Accepted alive Link to Nucleotide Sequence:NM_001347714.2Link to Protein Sequence:NP_001334643.1Re-query CCDS DB by Nucleotide ID:NM_001347714Re-query CCDS DB by Protein ID:NP_001334643Link to BLAST:NP_001334643.1
Original member Current member NCBI NM_001347715.2 NP_001334644.1 Accepted alive Link to Nucleotide Sequence:NM_001347715.2Link to Protein Sequence:NP_001334644.1Re-query CCDS DB by Nucleotide ID:NM_001347715Re-query CCDS DB by Protein ID:NP_001334644Link to BLAST:NP_001334644.1
Original member Current member NCBI NM_145246.5 NP_660289.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145246.5Link to Protein Sequence:NP_660289.2Re-query CCDS DB by Nucleotide ID:NM_145246Re-query CCDS DB by Protein ID:NP_660289Link to BLAST:NP_660289.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334641.1 315 Q70Z53-1 315 100% 0 0
NP_001334642.1 315 Q70Z53-1 315 100% 0 0
NP_001334643.1 315 Q70Z53-1 315 100% 0 0
NP_001334644.1 315 Q70Z53-1 315 100% 0 0
NP_660289.2 315 Q70Z53-1 315 100% 0 0

Chromosomal Locations for CCDS 7430.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 93669826 93669868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93670770 93670848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93676653 93676691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93681480 93681598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93684056 93684098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93685246 93685359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93687404 93687449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93692009 93692093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93692646 93692729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93694861 93694937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93698136 93698181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93698301 93698396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 93700030 93700106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGCATGGTCATGGAGGCTATGATTCTGATTTTAGTGATGATGAACGCTGTGGAGAATCCAGCAAAAGGA
AAAAAAGGACAGTTGAAGATGACTTACTGCTCCAAAAACCATTTCAGAAAGAAAAACATGGAAAGGTGGC
CCATAAACAAGTTGCAGCAGAATTGCTGGATAGGGAAGAAGCAAGAAATAGAAGGTTTCATCTCATAGCT
ATGGATGCTTATCAAAGACATACAAAGTTCGTAAATGACTATATTTTATACTATGGTGGCAAAAAAGAAG
ACTTCAAGCGTTTGGGGGAAAATGACAAGACAGACTTGGATGTTATACGAGAAAATCATAGATTCCTATG
GAATGAGGAGGACGAAATGGACATGACTTGGGAGAAGAGACTTGCTAAGAAATACTATGATAAATTATTT
AAGGAATACTGCATAGCAGATCTCAGTAAATATAAAGAAAATAAGTTTGGATTTAGGTGGCGAGTAGAAA
AAGAAGTAATTTCAGGAAAAGGTCAATTTTTCTGTGGAAATAAATATTGTGATAAAAAAGAAGGCTTAAA
GAGTTGGGAAGTTAATTTTGGTTATATTGAGCATGGTGAGAAGAGAAATGCACTTGTTAAATTAAGGTTA
TGCCAAGAATGTTCCATTAAATTAAATTTCCATCACAGGAGAAAAGAAATCAAGTCAAAAAAAAGAAAAG
ATAAAACCAAAAAAGACTGTGAAGAGTCATCACATAAAAAATCCAGATTATCTTCTGCAGAAGAGGCCTC
CAAGAAAAAAGATAAAGGACATTCATCTTCAAAGAAATCTGAAGATTCTCTACTTAGAAACTCTGATGAG
GAAGAAAGTGCTTCAGAATCTGAACTTTGGAAGGGTCCACTACCAGAGACAGATGAAAAATCACAGGAAG
AAGAATTTGATGAGTATTTTCAGGATTTGTTTCTATGA

Translation (315 aa):
MHGHGGYDSDFSDDERCGESSKRKKRTVEDDLLLQKPFQKEKHGKVAHKQVAAELLDREEARNRRFHLIA
MDAYQRHTKFVNDYILYYGGKKEDFKRLGENDKTDLDVIRENHRFLWNEEDEMDMTWEKRLAKKYYDKLF
KEYCIADLSKYKENKFGFRWRVEKEVISGKGQFFCGNKYCDKKEGLKSWEVNFGYIEHGEKRNALVKLRL
CQECSIKLNFHHRRKEIKSKKRKDKTKKDCEESSHKKSRLSSAEEASKKKDKGHSSSKKSEDSLLRNSDE
EESASESELWKGPLPETDEKSQEEEFDEYFQDLFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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