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Report for CCDS73927.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
73927.1 |
Public |
Homo sapiens |
16 |
SLC22A31 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:146429](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:73927.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:146429](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 16 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 73927.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000562855.7 |
ENSP00000474621.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000562855.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000474621.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000562855](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000474621](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000614943.4 |
ENSP00000481421.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000614943.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000481421.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000614943](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000481421](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384766.1 |
NP_001371695.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384766.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371695.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384766](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371695](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371695.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384767.1 |
NP_001371696.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384767.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371696.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384767](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371696](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371696.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384768.1 |
NP_001371697.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384768.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371697.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384768](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371697](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371697.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384769.1 |
NP_001371698.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384769.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371698.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384769](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371698](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371698.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 73927.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1017 nt): ATGGGGGCTGGCCTTTTCTCGGTGGTGGGCACCCTGCTGCTGCCCGGCCTGGCTGCGCTTGTGCAGGACT GGCGTCTTCTGCAGGGGCTGGGTGCCCTGATGAGTGGACTCTTGCTGCTCTTTTGGGGGTTCCCGGCCCT GTTCCCCGAGTCTCCCTGCTGGCTGCTGGCCACAGGTCAGGTAGCTCGAGCCAGGAAGATCCTGTGGCGC TTTGCAGAAGCCAGTGGCGTGGGCCCCGGGGACAGTTCCTTGGAGGAGAACTCCCTGGCTACAGAGCTGA CCATGCTGTCTGCACGGAGCCCCCAGCCCCGGTACCACTCCCCACTGGGGCTTCTGCGTACCCGAGTCAC CTGGAGAAACGGGCTTATCTTGGGCTTCAGCTCGCTGGTTGGTGGAGGCATCAGAGCTAGCTTCCGCCGC AGCCTGGCACCTCAGGTGCCGACCTTCTACCTGCCCTACTTCCTGGAGGCCGGCCTGGAGGCGGCAGCCT TGGTCTTCCTGCTCCTGACGGCAGATTGCTGTGGACGCCGCCCCGTGCTGCTGCTGGGCACCATGGTCAC AGGCCTGGCATCCCTGCTGCTCCTCGCTGGGGCCCAGTATCTGCCAGGCTGGACTGTGCTGTTCCTCTCT GTCCTGGGGCTCCTGGCCTCCCGGGCTGTGTCCGCACTCAGCAGCCTCTTCGCGGCCGAGGTCTTCCCCA CGGTGATCAGGGGGGCCGGGCTGGGCCTGGTGCTGGGGGCCGGGTTCCTGGGCCAGGCAGCCGGCCCCCT GGACACCCTGCACGGCCGGCAGGGCTTCTTCCTGCAACAAGTCGTCTTCGCCTCCCTTGCTGTCCTTGCC CTGCTGTGTGTCCTGCTGCTGCCTGAGAGCCGAAGCCGGGGGCTGCCCCAGTCACTGCAGGACGCCGACC GCCTGCGCCGCTCCCCACTCCTGCGGGGCCGCCCCCGCCAGGACCACCTGCCTCTGCTGCCGCCCTCCAA CTCCTACTGGGCCGGCCACACCCCCGAGCAGCACTAG
Translation (338 aa): MGAGLFSVVGTLLLPGLAALVQDWRLLQGLGALMSGLLLLFWGFPALFPESPCWLLATGQVARARKILWR FAEASGVGPGDSSLEENSLATELTMLSARSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRR SLAPQVPTFYLPYFLEAGLEAAALVFLLLTADCCGRRPVLLLGTMVTGLASLLLLAGAQYLPGWTVLFLS VLGLLASRAVSALSSLFAAEVFPTVIRGAGLGLVLGAGFLGQAAGPLDTLHGRQGFFLQQVVFASLAVLA LLCVLLLPESRSRGLPQSLQDADRLRRSPLLRGRPRQDHLPLLPPSNSYWAGHTPEQH
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