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Report for CCDS91615.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
91615.1 |
Public |
Homo sapiens |
11 |
OR8G3P |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:387815](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:91615.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:387815](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Polymorphic pseudogene |
Sequence IDs included in CCDS 91615.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000641572.1 |
ENSP00000501928.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000641572.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000501928.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000641572](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000501928](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000641848.1 |
ENSP00000502462.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000641848.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000502462.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000641848](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000502462](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001395906.1 |
NP_001382835.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001395906.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001382835.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001395906](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001382835](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001382835.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001382835.1 |
310 |
P0DMU2 |
310 |
99.6774% |
0 |
1 |
Chromosomal Locations for CCDS 91615.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also. |
Translation Exceptions: replace the symbol V (codon GTG) with M at amino acid position 1
Nucleotide Sequence (933 nt): GTGGACCCTGGAAACCATTCCTCAGTGACTGAGTCCATTCTGGCTGGGCTCTCAGAACAGCCAGAGCTCC AGCTGCGCCTCTTCCTCCTGTTCTTAGGAATCTGTGTGGTCACAGTGGTGGGCAACTTGGGCATGATCAC ACTGATTGGGCTCAGTTCTCACCTGCACACACCTATGTACTATTTCCTCAGCAGTCTGTCCTTCATTGAC TTCTGCCATTCCACTGTCATTACCCCTAAGATGCTGGTGAACTTTGCGACAGAGAAGAACATCATCTCCT ACCCTGAATGCATGGCTCAGCTCTATTTATTCAGTATTTTTGCTATTGCAGAGTGTCACATGTTGGCTGC AATGGCGTATGACTGTTATGTTGCCATCTGCAGCCCCTTGCTGTACAATGTCATCATGTCCTATCACCAC TGCTTCTGGCTCACAGTGGGAGTTTACATTTTAGGCATCCTTGGATCTACAATTCATACCAGTTTTATGT TGAGACTCTTTTTGTGCAAGACTAATGTGATTAACCATTATTTTTGTGATCTTTTCCCTCTCTTGGGGCT CTCCTGCTCCAGCACCTACATCAATGAATTACTGGTTCTGGTCTTGAGTGCATTTAACATCCTGATGCCT GCCTTAACCATCCTTGCTTCTTACATCTTTATCATTGCCAGCATCCTCCGCATTCACTCCACTGAGGGCA GGTCCAAAGCCTTTAGCACTTGCAGCTCCCACATCTTGGCTGTTGCTGTTTTCTTTGGATCTGCAGCATT CATGTACCTGCAGCCATCATCTGTCAGCTCCATGGACCAGAGGAAAGTGTCGTCTGTGTTTTATACTACT ATTGTGCCCATGCTGAACCCCCTGATCTACAGCCTGAGGAATAAAGATGTCAAACTTGCCGTGAAGAAAA TTCTGCATCAGACAGCATGTTAA
Translation (310 aa): MDPGNHSSVTESILAGLSEQPELQLRLFLLFLGICVVTVVGNLGMITLIGLSSHLHTPMYYFLSSLSFID FCHSTVITPKMLVNFATEKNIISYPECMAQLYLFSIFAIAECHMLAAMAYDCYVAICSPLLYNVIMSYHR CFWLTVGVYILGILGSTIHTSFMLRLFLCKTNVINHYFCDLFPLLGLSCSSTYINELLVLVLSAFNILMP ALTILASYIFIIASILRIHSTEGRSKAFSTCSSHILAVAVFFGSAAFMYLQPSSVSSMDQRKVSSVFYTT IVPMLNPLIYSLRNKDVKLAVKKILHQTAC
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