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Report for CCDS76823.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76823.1 Public Homo sapiens 16 MRTFB 24 110 108 CCDS HistoryNCBI Gene:57496Re-query CCDS DB by CCDS ID:76823.1Re-query CCDS DB by GeneID:57496See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76823.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000571589.6 ENSP00000459626.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000571589.6Link to Ensembl Protein Viewer:ENSP00000459626.2Re-query CCDS DB by Nucleotide ID:ENST00000571589Re-query CCDS DB by Protein ID:ENSP00000459626
Original member Current member NCBI NM_001308142.2 NP_001295071.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001308142.2Link to Protein Sequence:NP_001295071.1Re-query CCDS DB by Nucleotide ID:NM_001308142Re-query CCDS DB by Protein ID:NP_001295071Link to BLAST:NP_001295071.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295071.1 1099 Q9ULH7-5 1099 100% 0 0

Chromosomal Locations for CCDS 76823.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 14140607 14140760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14210243 14210308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14212354 14212409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14213545 14213620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14217126 14217287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14218820 14218998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14234146 14234283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14240237 14240484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14245528 14245660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14246473 14247507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14248926 14249081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14251862 14252023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14252365 14252502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14258101 14258161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14260909 14261444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3300 nt):
ATGGATCACACAGGGGCGATAGACACCGAGGATGAAGTGGGACCTTTAGCCCATCTTGCTCCAAGTCCTC
AGAGTGAAGCTGTGGCTCATGAATTCCAGGAACTCTCCTTGCAGTCCAGTCAAAACTTACCCCCTCTGAA
CGAAAGGAAAAATGTGCTCCAGCTGAGGCTGCAACAAAGGAGGACGAGAGAACAACTAGTGGACCAGGGC
ATCATGCCACCTTTGAAGAGCCCAGCGGCATTCCATGAACAGATAAAAAGCTTGGAACGAGCCAGAACTG
AAAACTTTTTGAAACACAAGATTCGGAGTCGACCAGATCGTTCTGAACTTGTCAGGATGCACATTTTAGA
AGAAACATTTGCAGAGCCATCCCTGCAGGCTACTCAGATGAAGTTGAAAAGAGCTCGACTAGCAGATGAT
CTGAATGAAAAGATTGCTCAAAGACCTGGTCCTATGGAGCTGGTAGAGAAAAACATCCTTCCTGTGGACT
CCAGTGTTAAAGAAGCAATTATAGGCGTTGGGAAGGAGGACTATCCCCACACTCAGGGCGATTTCTCATT
TGATGAAGACAGCAGTGACGCTTTGTCTCCGGACCAGCCTGCGAGTCAGGAGTCACAGGGGTCAGCCGCG
TCCCCAAGTGAGCCAAAAGTTAGTGAATCGCCATCTCCTGTGACTACAAACACTCCAGCGCAGTTTGCTT
CAGTGTCCCCAACAGTTCCTGAATTCTTGAAAACTCCTCCAACTGCAGATCAGCCTCCCCCACGGCCTGC
AGCTCCTGTCCTCCCCACAAACACTGTGTCCTCAGCAAAGCCTGGCCCAGCACTGGTGAAGCAAAGCCAT
CCCAAGAATCCAAATGACAAACACCGTAGCAAAAAGTGCAAAGATCCCAAACCACGGGTAAAGAAGTTAA
AGTACCACCAATACATTCCACCAGATCAGAAGGGTGAGAAGAATGAGCCGCAGATGGACTCTAACTACGC
CCGCCTGCTCCAGCAGCAGCAGCTGTTCCTGCAACTGCAGATCCTGAGTCAGCAGAAGCAGCACTACAAC
TACCAGACCATCCTGCCTGCACCATTCAAGCCACTCAATGACAAAAATAGTAACAGTGGGAATTCAGCTT
TGAACAATGCCACACCTAACACACCAAGACAGAATACATCTACTCCTGTGAGAAAGCCAGGACCTCTGCC
TTCTAGCCTGGATGACTTAAAGGTATCAGAACTGAAGACAGAACTGAAGTTAAGGGGTCTGCCAGTGTCA
GGCACCAAACCGGACCTCATTGAGCGCCTAAAACCCTACCAGGAAGTGAACAGCAGCGGCCTTGCTGCTG
GGGGCATCGTGGCAGTGTCATCATCAGCCATTGTCACCAGTAACCCAGAAGTCACTGTGGCCTTGCCGGT
TACAACACTACACAACACTGTGACTAGCTCAGTCTCTACTCTCAAGGCAGAATTGCCACCTACAGGAACC
AGCAACGCAACCCGTGTGGAAAATGTTCATTCCCCTCTGCCCATTTCACCATCTCCCTCCGAACAGTCCA
GTCTCAGTACTGATGACACAAACATGGCAGACACTTTCACCGAGATTATGACCATGATGTCGCCTTCACA
GTTCTTGAGTTCATCTCCTTTGAGAATGACAAATAATGAAGACAGTCTGAGTCCCACCAGCAGCACTCTG
TCAAACCTGGAACTGGATGCAGCCGAAAAGGATCGCAAGCTTCAGGAGAAAGAGAAGCAAATCGAAGAGC
TGAAGAGGAAACTGGAACAAGAGCAGAAGCTCGTGGAAGTGCTGAAAATGCAACTTGAGGTTGAAAAACG
AGGGCAGCAGCAGCGGCCCCTGGAAGCCCAGCCCAGTGCCCCAGGTCATTCTGTCAAGTCAGATCAGAAG
CACGGCAGCCTTGGCTCCTCCATCAAAGATGAGGCCTCACTCCCTGACTGCTCCAGCTCCAGGCAGCCCA
TCCCAGTAGCCAGCCACGCTGTAGGCCAGCCCGTCTCTACAGGTGGCCAGACCCTTGTTGCCAAAAAGGC
TGTAGTTATCAAGCAAGAGGTCCCTGTGGGCCAGGCAGAGCAGCAGAGTGTCGTCTCGCAGTTTTATGTG
AGTTCCCAGGGACAGCCACCGCCTGCTGTTGTTGCTCAGCCCCAGGCTTTACTGACCACGCAGACTGCTC
AGCTGCTGCTCCCAGTGTCCATCCAGGGCTCGAGTGTCACCTCAGTGCAACTCCCTGTAGGCAGCCTCAA
ACTCCAGACTTCACCACAAGCAGGAATGCAGACTCAGCCTCAGATAGCAACTGCTGCACAAATACCAACT
GCTGCCTTGGCCTCAGGCTTGGCCCCAACTGTACCTCAGACACAAGACACGTTCCCGCAGCATGTGCTCA
GTCAGCCTCAACAAGTCAGAAAGGTTTTCACAAACTCAGCATCATCAAATACAGTTCTTCCATATCAGAG
ACATCCTGCCCCAGCTGTCCAGCAGCCCTTTATCAATAAGGCCTCCAACAGTGTTCTTCAATCCAGAAAT
GCTCCGCTTCCATCCCTGCAAAATGGACCTAACACACCCAACAAGCCTAGTTCACCCCCGCCACCCCAGC
AATTTGTCGTCCAGCACTCTCTATTTGGGAGTCCAGTCGCCAAGACAAAAGATCCCCCCCGCTATGAGGA
GGCCATCAAGCAGACACGCAGCACACAGGCCCCTCTGCCAGAGATTTCCAACGCTCACAGTCAGCAGATG
GATGACCTCTTTGATATCCTCATTAAGAGTGGAGAGATCTCCCTCCCCATAAAAGAAGAACCTTCTCCTA
TTTCCAAAATGAGACCAGTGACAGCCAGCATCACCACAATGCCAGTGAATACAGTGGTGTCCCGGCCACC
ACCCCAAGTCCAAATGGCACCACCTGTATCTTTAGAACCTATGGGCAGTTTATCTGCCAGCTTAGAGAAC
CAACTAGAAGCTTTCTTGGATGGAACTTTACCCTCAGCCAATGAAATTCCTCCACTACAAAGCAGCAGTG
AAGACAGAGAGCCCTTCTCTCTGATCGAGGACCTCCAGAATGATCTGCTGAGTCACTCAGGTATGCTGGA
CCATTCACACTCACCCATGGAGACTTCCGAGACCCAGTTTGCTGCAGGTACTCCCTGTCTGTCTCTCGAC
CTGTCAGACTCAAACTTGGACAACATGGAGTGGTTGGACATTACCATGCCCAACTCCTCTTCAGGACTCA
CTCCTCTCAGCACCACCGCGCCGAGCATGTTCTCTGCTGACTTTCTAGACCCACAGGACCTACCGCTGCC
ATGGGACTAA

Translation (1099 aa):
MDHTGAIDTEDEVGPLAHLAPSPQSEAVAHEFQELSLQSSQNLPPLNERKNVLQLRLQQRRTREQLVDQG
IMPPLKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHILEETFAEPSLQATQMKLKRARLADD
LNEKIAQRPGPMELVEKNILPVDSSVKEAIIGVGKEDYPHTQGDFSFDEDSSDALSPDQPASQESQGSAA
SPSEPKVSESPSPVTTNTPAQFASVSPTVPEFLKTPPTADQPPPRPAAPVLPTNTVSSAKPGPALVKQSH
PKNPNDKHRSKKCKDPKPRVKKLKYHQYIPPDQKGEKNEPQMDSNYARLLQQQQLFLQLQILSQQKQHYN
YQTILPAPFKPLNDKNSNSGNSALNNATPNTPRQNTSTPVRKPGPLPSSLDDLKVSELKTELKLRGLPVS
GTKPDLIERLKPYQEVNSSGLAAGGIVAVSSSAIVTSNPEVTVALPVTTLHNTVTSSVSTLKAELPPTGT
SNATRVENVHSPLPISPSPSEQSSLSTDDTNMADTFTEIMTMMSPSQFLSSSPLRMTNNEDSLSPTSSTL
SNLELDAAEKDRKLQEKEKQIEELKRKLEQEQKLVEVLKMQLEVEKRGQQQRPLEAQPSAPGHSVKSDQK
HGSLGSSIKDEASLPDCSSSRQPIPVASHAVGQPVSTGGQTLVAKKAVVIKQEVPVGQAEQQSVVSQFYV
SSQGQPPPAVVAQPQALLTTQTAQLLLPVSIQGSSVTSVQLPVGSLKLQTSPQAGMQTQPQIATAAQIPT
AALASGLAPTVPQTQDTFPQHVLSQPQQVRKVFTNSASSNTVLPYQRHPAPAVQQPFINKASNSVLQSRN
APLPSLQNGPNTPNKPSSPPPPQQFVVQHSLFGSPVAKTKDPPRYEEAIKQTRSTQAPLPEISNAHSQQM
DDLFDILIKSGEISLPIKEEPSPISKMRPVTASITTMPVNTVVSRPPPQVQMAPPVSLEPMGSLSASLEN
QLEAFLDGTLPSANEIPPLQSSSEDREPFSLIEDLQNDLLSHSGMLDHSHSPMETSETQFAAGTPCLSLD
LSDSNLDNMEWLDITMPNSSSGLTPLSTTAPSMFSADFLDPQDLPLPWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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