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Report for CCDS40185.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40185.1 |
Public |
Mus musculus |
7 |
Deaf1 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 40185.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000080553.8 |
ENSMUSP00000079395.7 |
Accepted |
alive |
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NCBI |
NM_016874.3 |
NP_058570.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_058570.1 |
566 |
Q9Z1T5-1 |
566 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 40185.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1701 nt): ATGGAGGACTCGGACTCGGCGGCAAAACAGCTGGGCCTGGCCGAGGCGGCAGCTGTGGCGGCCGCTGCCG CGGTGGCGGCGGCCGCCGCGGCCGCAGCGGAAAGCGAGGCGGAGGAGCCGGTGTTAAGCAGAGACGAGGA CTCGGAGGAGGACGCAGACTCCGAGGCGGAGCGCGAGACGCGGCGGGTCACCGCTGTGGCGGTGATGGCG GCCGAATCTGGGCACATGGATATGGGTACCGAGGCTCTGCCCAGCCCCGATGAGGCCGCCGCCGCCGCCG CCGCCTTCGCAGAAGTGACCACAGTGACTGTGGCCAACGTGGGGTCCTCTGCAGATAACGTCTTCACAAC ATCAGTGGCAAACGCAGCATCGATATCAGGACATGTCCTGTCTGGTAGGACAGCCCTGCAGATCGGTGAC AGCCTGAACACTGAAAAAGCCACACTAATAGTTGTACACACAGATGGGAGCATTGTGGAGACCACTGGGC TGAAGGGCCCAGCAGCACCTCTCACTCCAGGTCCCCAGTCTCCTCCTACCCCACTGGCACCTGGCCAGGA GAAAGGTGGTACCAAGTACAACTGGGACCCTTCGGTGTATGACAGCGAGTTGCCTGTGCGCTGTCGGAAC ATCAGTGGCACGCTCTACAAGAGTAGGCTCGGCTCAGGTGGCCGGGGCCGGTGTATCAAGCAGGGAGAAA ACTGGTACAGCCCAACTGAGTTTGAAGCTATGGCAGGAAGAGCCAGCAGCAAGGACTGGAAGAGAAGCAT CCGCTATGCTGGCAGACCCCTGCAGTGCCTCATTCAGGATGGTATTTTGAACCCTCACGCTGCCTCCTGT ACCTGTGCCGCCTGTTGTGATGACATGACTCTGAGTGGCCCTGTCAGGCTCTTCGTCCCTTATAAAAGGC GCAAGAAAGAGAATGAGCTGCCCACAACTCCAGTGAAGAAGGATTCCCCCAAGAACATCACCCTGCTTCC TGCCACGGCGGCCACCACCTTCACTGTGACACCCTCAGGACAGATCACTACCTCTGGAGCACTGACCTTT GACAGAGCATCCACTGTAGAGGCCACTGCTGTCATCTCTGAGAGCCCAGCCCAAGGTGATGTCTTTGCAG GAGCCACAGTGCAAGAGGCAGGTGTGCAGCCTCCCTGCAGGGTTGGCCACCCTGAACCCCACTACCCTGG CTATCAGGACAGCTGCCAGATTGCCCCGTTTCCAGAAGCTGCATTGCCAACATCACACCCCAAAATTGTC CTGACATCGCTGCCCGCATTGGCCGTGCCACCGTCCACCCCCACCAAAGCTGTCTCTCCCACCGTGGTCA GTGGGCTGGAGATGTCAGAACATCGGAGCTGGCTGTACCTGGAAGAGATGGTCAACTCCCTACTCAACAC AGCTCAGCAGCTGAAGACGCTGTTTGAACAAGCCAAGCAGGCGAGCTCTTGCAGGGAAGCTGCTGTGACC CAGGCGAGAATGCAGGTTGATACAGAGAGGAAAGAGCAGTCATGTGTCAACTGCGGCCGGGAGGCCATGA GTGAGTGTACCGGCTGCCACAAGGTTAACTACTGCTCTACGTTCTGCCAGCGCAAGGACTGGAAAGACCA TCAGCATGTGTGTGGCCAGTCAGCGTCTGTCACTGTCCAGGCTGATGACGTCCATGTTGAAGAAAGTGTG ATAGAAAAAGTTGCTGTTTGA
Translation (566 aa): MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAESEAEEPVLSRDEDSEEDADSEAERETRRVTAVAVMA AESGHMDMGTEALPSPDEAAAAAAAFAEVTTVTVANVGSSADNVFTTSVANAASISGHVLSGRTALQIGD SLNTEKATLIVVHTDGSIVETTGLKGPAAPLTPGPQSPPTPLAPGQEKGGTKYNWDPSVYDSELPVRCRN ISGTLYKSRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASC TCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTF DRASTVEATAVISESPAQGDVFAGATVQEAGVQPPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIV LTSLPALAVPPSTPTKAVSPTVVSGLEMSEHRSWLYLEEMVNSLLNTAQQLKTLFEQAKQASSCREAAVT QARMQVDTERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHVCGQSASVTVQADDVHVEESV IEKVAV
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