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Report for CCDS18746.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
18746.1 |
Public |
Mus musculus |
4 |
Wdtc1 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:230796](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:18746.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:230796](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 18746.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000043305.13 |
ENSMUSP00000040647.7 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000043305.13](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000040647.7](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000043305](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000040647](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_199306.4 |
NP_955010.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_199306.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_955010.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_199306](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_955010](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_955010.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_955010.1 |
677 |
Q80ZK9 |
677 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 18746.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2034 nt): ATGGCAAAAGTCAACATAACTAGAGACCTCATTCGTAGGCAAGTCAAGGAGCGGGGTGCCCTGAGCTTTG AACGGCGATATCATGTCACAGACCCCTTTATCCGACGGCTGGGCCTGGAGGCGGAGCTTCAGGGACACTC AGGCTGTGTCAACTGTCTGGAGTGGAATGAGAAAGGAGACCTGCTGGCGTCTGGTTCCGACGACCAGCAC ACCATTGTGTGGGACCCACTGCACCACAAGAAGCTGCTGTCCATGCACACAGGACACACAGCAAATATCT TCTCTGTCAAGTTCCTGCCTCATGCTGGAGACCGCATTTTGATCACGGGGGCAGCTGACTCCAAGGTGCA CGTCCACGACCTTACGGTAAAGGAGACGATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATT GCCACGGCGCCCATGTGGCCTAACACGTTCTGGAGCGCCGCAGAGGATGGGCTTATCCGCCAGTATGACC TTCGGGAGAACAGCAAACACTCAGAGGTGCTGATTGACCTAACAGAATACTGTGGCCCGATGGTGGAGGC CAAGTGCCTCACCGTCAACCCCCAGGATAACAACTGCCTGGCAGTAGGGGCCAGTGGGCCCTTTGTGAGG CTCTATGACATTCGAATGATCCACAACCACAGAAAGAGCATGAGGCAGAGCCCTTCCGCAGGCGTGCATA CCTTCTGTGACCGACAGAAGCCCCTTCCGGACGGTGCAGCGCAGTATTATGTCGCAGGTCACCTGCCGGT GAAGCTGCCTGACTATAACAGCCGTCTGAGAGTGCTGGTTGCCACCTATGTGACCTTCAGCCCCAATGGC ACAGAGCTGCTAGTCAACATGGGAGGAGAGCAGGTGTATCTGTTTGACTTGACTTACAAGCAACGGCCAT ATACCTTCCTCTTGCCTAGAAAATGCCACTCCGTGGAAGTCCAGAACGGCAAGATGTCTACTAACGGGGT GTCCAACGGCGTGTCGAATGGCCTACACCTTCACAGCAACGGCTTCCGGCTGCCAGAGAGCAAGGGGTGC ATCAGCCCCCAGGTGGAGCTGCCCCCATACCTGGAGCGTGTGAAGCAGCAGGCCAATGAAGCCTTCGCCT GCCAGCAGTGGACCCAGGCCATCCAGCTCTACAGCCAGGCTGTGCAGAAGGCCCCGCACAACGCTATGCT CTATGGCAACCGAGCTGCCGCCTACATGAAGCGCAAGTGGGACGGGGACCACTATGATGCCCTCCGGGAC TGCCTCAAGGCCATCTCCCTAAACCCTTGCCACCTGAAGGCACACTTCCGTCTGGCCCGGTGCCTCTTTG AACTGAAGTATGTGGCCGAGGCTCTGGAGTGCCTGGATGACTTCAAAGGGAAGTTCCCAGAGCAGGCCCA CAGCAGTGCATGTGACGCATTAGGCCGGGACATCACAGCTGCCCTTTTCTCCAAAAGTGATGGTGAGGAG AAGAAGGCAGCTGGTGGTGGTGGTGGTCCAGTTCGCCTTCGAAGCACAAGTCGCAAGGACTCCATCTCAG AAGACGAAATGGTGCTACGGGAACGGAGCTACGACTATCAGTTCCGCTACTGTGGGCACTGCAACACCAC CACGGATATCAAGGAGGCCAATTTCTTTGGCAGCAATGCTCAGTACATTGTCAGCGGCTCTGATGACGGC TCCTTCTTCATCTGGGAAAAGGAGACCACCAACCTCGTCCGAGTGCTGCAGGGGGATGAGTCCATTGTCA ACTGCTTGCAGCCCCATCCCAGCTACTGCTTCCTGGCCACCAGTGGCATCGACCCTGTTGTGCGACTGTG GAACCCACGACCAGAGAGTGAAGACCTCACAGGCCGAGTTGTGGAAGATATGGAGGGTGCATCTCAGGCC AACCAGCGGCGCATGAATGCCAACCCCCTGGAGGCGATGCTGCTGGACATGGGCTATCGGATCACAGGCC TGAGCAGCGGGGGCGCCGGGGCCTCTGATGACGAGGACAGCGCAGAGGGCCAGGTGCAGTGCCGGCCCAG CTAG
Translation (677 aa): MAKVNITRDLIRRQVKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQH TIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHDLTVKETIHMFGDHTNRVKRI ATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEYCGPMVEAKCLTVNPQDNNCLAVGASGPFVR LYDIRMIHNHRKSMRQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNSRLRVLVATYVTFSPNG TELLVNMGGEQVYLFDLTYKQRPYTFLLPRKCHSVEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESKGC ISPQVELPPYLERVKQQANEAFACQQWTQAIQLYSQAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALRD CLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDITAALFSKSDGEE KKAAGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDG SFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESEDLTGRVVEDMEGASQA NQRRMNANPLEAMLLDMGYRITGLSSGGAGASDDEDSAEGQVQCRPS
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